| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1291 |
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| Symbol | |
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| ID | 6160390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1375169 |
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| End bp | 1375927 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664045 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790325 |
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| Protein GI | 171057976 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000742874 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGC TGATCACCGA CCCGTGGTTC TACGCGGTCG CGTTGCCGTC GGTGCTGCTG
CTGGGGCTGT CGAAGTCGGG TTTTGCCTCC GGGCTGGGTT CGCTGGCCAC GCCGATGCTG
GCGCTGGCGC TGCCGGTGCC GCAGGCCGCG GCCATCATGC TGCCGCTGCT GGCGGTGGCC
GACGTGATGG CCTTGTGGAC GCTGCGCCGC CATGCCGATC GTGCCGTGCT GTGGATGCTG
CTGCCGGCCG GGCTGGTCGG CATCGTGATC GGCTGGCTCA GTTTCGGCCT GCTGCCCGGT
CACATCGTGG CCGGCATCGT CGGCGTGGTG ACGCTGGCCT TCCTGGCCTG GCAGCTGATC
TGGCCGCCAC GCGCCGACGC GCCGCTGCCG GGCCACCGCC AGACCGGCGC GCTGGCGCTG
ATGGCCGGCT ACACCAGCTT CGTCGCCCAC GGCGGCGGCC CGCCGGTGGC GATGGCGCTG
CTGCCGCGGC GCATGGAGCC GCTGGCCTAC GCCGGCACCT CGGCGGTGTT CTTCGCCAGC
ATCAACGCTG CCAAGTGGCT GCCTTATGCG GCGCTCGGCC TGCTCGACGG CCGCAACCTC
TCGACCTCGG TGCTGCTGAT GCCGCTGGCC GCCGGCGGCG TGCTGCTGGG CGTGTGGGCG
GCCAAGCGCA TCTCGTCGCG CTGGTTCTAC CGGCTGGTGC AGGTGGGCAT GCTGCTGACC
GGCCTGAAGC TGCTGGCCGA CGCGTTCTGG CCTGCGTGA
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| Protein sequence | MSQLITDPWF YAVALPSVLL LGLSKSGFAS GLGSLATPML ALALPVPQAA AIMLPLLAVA
DVMALWTLRR HADRAVLWML LPAGLVGIVI GWLSFGLLPG HIVAGIVGVV TLAFLAWQLI
WPPRADAPLP GHRQTGALAL MAGYTSFVAH GGGPPVAMAL LPRRMEPLAY AGTSAVFFAS
INAAKWLPYA ALGLLDGRNL STSVLLMPLA AGGVLLGVWA AKRISSRWFY RLVQVGMLLT
GLKLLADAFW PA
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