Gene Lcho_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1271 
Symbol 
ID6162630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1355895 
End bp1356479 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID641664025 
Producthypothetical protein 
Protein accessionYP_001790305 
Protein GI171057956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000775197 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCAGC CTTCGAACTT CCGCCCCCTT TCCATCCTGA TCGCCACGGC CGCCGCCGCC 
ACGCTGAGCG CCTGCGGCTC GATGAACCCG ATGCCGTCGA TGAAACCGAT GGCATCGACC 
TTCTCGCAGG ACAGCCTGCC CGACACCATC AAGGTGCCCG CCGGCCACAA GGTCGCGATG 
GAGACGGTGG GTGCCGGCGA CATCACCTAC GAATGCCGCG AGAAGGCCGA CGCCGCCGGC 
CAGACCGCCT GGGTGTTCGT CGGCCCGGAT GCCAAGCTGA TGGACCGCAG CGGCAAGCAG 
GTCGGCAGGT ACTTCGGTCC GCCGGCCACC TGGGAGTCGA TGGACGGCTC CAAGGTCACC 
GCCACCCAGC TGGCCGTGGC GCCGGCCGGT GCGGGCAATC TGCCGCTGCA GCTGGTGAAG 
GCCAACCCGG CGATGGGCAT GGGCGCGATG AACGGCGTGA CCCACATCCA GCGTGTCGCG 
CTCAAGGGCG GCGTGGCACC GGCCAGTGCG TGCACGATGG CCAACAAGGG CGAGAAGCAG 
ACCGTGCGCT ATCAGGCCGA CTACATCTTC TGGACCGCGA TGTGA
 
Protein sequence
MTQPSNFRPL SILIATAAAA TLSACGSMNP MPSMKPMAST FSQDSLPDTI KVPAGHKVAM 
ETVGAGDITY ECREKADAAG QTAWVFVGPD AKLMDRSGKQ VGRYFGPPAT WESMDGSKVT 
ATQLAVAPAG AGNLPLQLVK ANPAMGMGAM NGVTHIQRVA LKGGVAPASA CTMANKGEKQ 
TVRYQADYIF WTAM