| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1260 |
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| Symbol | |
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| ID | 6162917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1346403 |
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| End bp | 1347251 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664014 |
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| Product | thymidylate synthase |
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| Protein accession | YP_001790294 |
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| Protein GI | 171057945 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000721083 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACCG AAGCGAGTTT CCAGCGCCCC GTGCGCTCCC AGTTCGAAGA CCTGATGCGC
CTGGTGCACA CCACCGGCGT GGCCAAGGGC GACCGCACCG GCACCGGCAC GCGCAGCCTG
TTCGGCCACC AGATGCGCTT CGATCTCAGC GAAGGTTTCC CGCTGGTGAC GACCAAGAAG
GTGCACCTGA AGTCGATCAT CCTGGAGCTG CTGTGGTTTT TGCGCGGCGA GCGCAACGTG
CGCTGGCTGC AGGAGCGCGG CTGCACCATC TGGGACGAAT GGGCGCGTGA CGACGGTGAT
CTCGGGCCGG TCTACGGCGT GCAATGGCGC AGCTGGCCGA CCGCCGACGG CGGCCACATC
GACCAGATCG CCGAGGTGGT GCAGCAGCTG CGCAGCAACC CCGATTCGCG CCGCATCATC
GTCAGCGCCT GGAACGTGGC CGAGCTGCCG CAGATGGCGC TGATGCCCTG CCACGCGCTG
TTCCAGTTCT ACGTCGCGCC GGCCACGCAC GAAGGCGGCC GCGGCAAGCT CAGCTGCCAG
CTCTACCAGC GCAGCGCGGA CATCTTCCTG GGCGTGCCGT TCAACATCGC CAGCTACGCG
CTGCTGACCC ACATGCTGGC GCAGCAATGC GACCTCGACG TGGGCGACTT CATCTGGACC
GGCGGCGACT GCCACCTCTA CGACAACCAC ACCACGCAGG TCGAGACCCA GCTGGCGCGC
ACGCCCTTCG CGTATCCGAC GCTGCACATC AAGCGCCGGC CGGCATCGAT CTTCGACTAC
GCCTGCGACG ACTTCGAGGT GCTCGACTAC CAGCACCACC CGGCCATCAA GGCGCCGGTG
GCGGTATGA
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| Protein sequence | MSTEASFQRP VRSQFEDLMR LVHTTGVAKG DRTGTGTRSL FGHQMRFDLS EGFPLVTTKK
VHLKSIILEL LWFLRGERNV RWLQERGCTI WDEWARDDGD LGPVYGVQWR SWPTADGGHI
DQIAEVVQQL RSNPDSRRII VSAWNVAELP QMALMPCHAL FQFYVAPATH EGGRGKLSCQ
LYQRSADIFL GVPFNIASYA LLTHMLAQQC DLDVGDFIWT GGDCHLYDNH TTQVETQLAR
TPFAYPTLHI KRRPASIFDY ACDDFEVLDY QHHPAIKAPV AV
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