| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1257 |
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| Symbol | |
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| ID | 6162914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1343600 |
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| End bp | 1344607 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664011 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001790291 |
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| Protein GI | 171057942 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000374311 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACGATC ACTCCGGACA TGACCATCCC GCCCACGGCT TGAAGGCCTC CGACGCGCAT
GGACACCGGC ATGCGCACGG GCACGCACAC AGCCACGCGC CGGCCGACTT CAACACCGCC
TTCGCGATCG GCATCGCGCT CAACATCGCC TTCGTCGCGA TCGAGGCCTT CTACGGCTGG
AAGATCAACT CGCTGGCGCT GCTGGCCGAC GCCGGCCACA ACCTGAGCGA CGTCGCCGGC
CTGGTGCTGG CCTGGGGCGG CGCGCTGGCC GGCCGGCTGC GGCCCGACGC GCGCCACACC
TACGGCTGGA AGCGGGCTTC CATCCTGGCC GCGTTTGCCA ACGCGCTGCT GCTGCTGGTG
GCGATGGGGT CGCTGGCCTG GGAGGCGGCG CAGCGCCTGC AGTCGCCCGA GGCCACCGAG
GGCTGGACCC TCATCGCGGT GGCCGGCGTG GGCATCGTCG TCAACGCCGC CACCGCTGCG
CTGTTCATGC GCGGGCGCGA GGACGATCTC AACATCCGCG GCGCCTTCCT GCACATGGCC
GCCGATGCGC TGGTGTCGCT GGGCGTGGTG ATCGGCGGCG CGCTCTACCT GTGGCAGGGC
TGGGCCTGGA TCGACCCGGT GATGAGCCTG GCGATCGCCG CGGTGATCGT GCTGGGCACC
TGGGGCCTGT TGCGCCAGTC GCTGCACCTG CTGTTCGACG GCGTGCCCGA GCACATCGAC
CTGCACGCGG TGCGCGAGCT GCTGCTGGGC CTGCCGGGCG TGAGCGAGGT CCACGACCTG
CATGTCTGGG CGATGGGTAC CTCGCAGAAC GCGCTGACCG CGCACCTGGT GCTGACCGAG
TCGAGCGGCG AGCCGGGCCA GGCGCCGGCC GCCGACCCGG TCCTCGTGCT GTGCCGGGCC
GAACGGGCGC TGCACACGCA CTTCGAGATC CGCCACGTCA CGCTGCAGCT CGAGCCGCCG
GCGTATGCAC GGCAATGCCG GTTGCGAGGC GACGCCGGCT GCGCCTGA
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| Protein sequence | MHDHSGHDHP AHGLKASDAH GHRHAHGHAH SHAPADFNTA FAIGIALNIA FVAIEAFYGW
KINSLALLAD AGHNLSDVAG LVLAWGGALA GRLRPDARHT YGWKRASILA AFANALLLLV
AMGSLAWEAA QRLQSPEATE GWTLIAVAGV GIVVNAATAA LFMRGREDDL NIRGAFLHMA
ADALVSLGVV IGGALYLWQG WAWIDPVMSL AIAAVIVLGT WGLLRQSLHL LFDGVPEHID
LHAVRELLLG LPGVSEVHDL HVWAMGTSQN ALTAHLVLTE SSGEPGQAPA ADPVLVLCRA
ERALHTHFEI RHVTLQLEPP AYARQCRLRG DAGCA
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