| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1254 |
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| Symbol | |
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| ID | 6161098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1341543 |
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| End bp | 1342286 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664008 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001790288 |
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| Protein GI | 171057939 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000191054 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCGCA TGACCGGGAT CGCGATCTAC CGCCAGGACG ATCGCCATCC CCAGGCGCAG
GCCTGCGCGG CCTGCGAGGT GCGCAGCTCG GCGCTGTTCG GTGCGCTCGA CGATGCCGGC
CTCGACCGCA TCCACACCCA CATCGCCAGC CTGACGTTCG ATCCCGATGC CACCGTCTAC
GACCGCGGCA CCGCGGGGCT CGCGGTCTAC ACCGTCCGTG CCGGGCTGGT CCGTTTCGAG
CGCACCACCG AGCGCGGCGA CCGGCGCATC GTCCGGCTGG CCGGTCGCGG CGACCTGATC
GGCCAGGAGG CCCTGCTGCA GCGGCCCTAT GCCGACGAGG CGGTGGCGTG CACGCCGGTG
CAGCTGTGCC GTATCCCGCG CACGCTCATC GACGAGCTGG CGCGGGGCGA GGGCACGCTG
CCCCGTGAAC TGATGTTGCG ATGGCAGGTG GCACTCGATG CCGCCGAGAC CTGGGTCGCC
GACCTGTCGA CAGGTCCGGC GCGCCGGCGC CTGCTGCGCC TGCTGCTGCG GCTGTCCGAG
CATGCCGACC CGGGCGGCCA GATCTGGATG CCGCGCCGCG AGGAGATCGG CGCCATGCTC
GACATGACGG TGGAAACCGC CAGCCGCCTG ATCAGCGCGT TGCGGCGCGA AGGCGTGCTC
GAGCTGGCGC GCTCGCGCAG CCGCAGTGCC CGGCTGGATG CAGCCGCGTT GCAGAAGGCC
TTGCGCGCCG AGGATTCGGC CTGA
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| Protein sequence | MLRMTGIAIY RQDDRHPQAQ ACAACEVRSS ALFGALDDAG LDRIHTHIAS LTFDPDATVY
DRGTAGLAVY TVRAGLVRFE RTTERGDRRI VRLAGRGDLI GQEALLQRPY ADEAVACTPV
QLCRIPRTLI DELARGEGTL PRELMLRWQV ALDAAETWVA DLSTGPARRR LLRLLLRLSE
HADPGGQIWM PRREEIGAML DMTVETASRL ISALRREGVL ELARSRSRSA RLDAAALQKA
LRAEDSA
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