| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1249 |
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| Symbol | |
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| ID | 6163925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1337194 |
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| End bp | 1338456 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641664003 |
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| Product | deoxyribodipyrimidine photolyase-like protein |
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| Protein accession | YP_001790283 |
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| Protein GI | 171057934 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00252669 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGACC TGCTGGACCA CCGACTCGAA GACAGCCCGG CGCCCTGGGC CGACACGCTG
CCCCCGACGC GCAGCGCGGC GTTGGCGCGC ATCGCCCGCG TGCGGCCCGC CGCCTACGCG
CGCACCCGCA ACCACCTCGA CGGCGCGGTG ACGGGCCTGT CACCCTACCT GACGCACGGC
CTGATCACGC TGCCCGAGGT GCTGGCCGGC GTGCTGCAGC GCGAGCGGCT GGAGGTGCGG
CACAAGCTGG TGTTCGAGCT GGGCTGGCGC GAGTTCTTCC GCCATGCCTG GGGCCACGCG
GGCGACGCCA TCCTGCAGTC GCTGCACACC GGCCCGCGCC CGGATGAAAC CTGCGCGCCG
GTGCTGCCGG CCGACATCCG CCAGGCGCGC ACCGGCGTGC CGGTCATCGA CGAGGCGGTG
CGCACGCTCT ACGCGACCGG CACGCTGCAC AACCACGCCC GCATGTGGCT GGCCAGCTAC
GTGGTGCACC TGCGTCACGT GCACTGGCGC GCGGGCGCCG ACTGGCTGGT GGCGCACCTG
CTCGACGGCG ATCTGGCCAG CAACCACCTC AGCTGGCAGT GGGTGGCCGG AACCGGCAGC
CACAAGCCGT ATCTCTTCAA CGCCGACAAC GTGGCGTGCT ACGCGCCCGC CCACTGGCAC
AGCGCCGGCA CCGTGATCGA CCAGTCCTAC GAGGCGCTGG ACCGCATCGC CCGCAGCGCC
ACGCCGACAG CCGCCCCCGG CCCGGCCTCC CGTGCGCCGA TGGCCGAGAC AGCCGCCACG
CCCGAGCCGC CGCTGCTCGC CGCACCACCC GCCGGCCTGG GGCTGCGCGT GCCCGATGCC
GCCTGCGCCG AGCGGCTGCG CGGGCGCGAG GTCTGGCTGG TGCACCCGTG GGCGCTGCGT
GCGCCGCCGG CCGACCTGCC CGACGGTGCC GTGCGGATCG GCGTGTACCT GCGCGAACAC
CACCAGGCCT GGCCCTGGCC CGAGTCACGC TGGCGCTGGG TCGACACGGC GATGGCTGCG
GTGACTGCGC AACGCTGGTT CGTCGACGCC GCCGGCCTGG CCAACGCGCT GGCGGGCGCG
GCGCGCGTGC GCAGCGTCGA CGACCCGCAC CTCACGCGCT GGCTCCGGCC CGTGGCGCAG
CTGGACGCGG CACCGACGCT GTTCCCGCCG GTGGCGCGGC GCTGCGAGAG CTTCTCGCAG
TGGTGGACCC GCGCCACGCG CGGTCTGCAC CATGCCGAGG AGCTGCTGTG CAGCCGCGAC
TGA
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| Protein sequence | MSDLLDHRLE DSPAPWADTL PPTRSAALAR IARVRPAAYA RTRNHLDGAV TGLSPYLTHG
LITLPEVLAG VLQRERLEVR HKLVFELGWR EFFRHAWGHA GDAILQSLHT GPRPDETCAP
VLPADIRQAR TGVPVIDEAV RTLYATGTLH NHARMWLASY VVHLRHVHWR AGADWLVAHL
LDGDLASNHL SWQWVAGTGS HKPYLFNADN VACYAPAHWH SAGTVIDQSY EALDRIARSA
TPTAAPGPAS RAPMAETAAT PEPPLLAAPP AGLGLRVPDA ACAERLRGRE VWLVHPWALR
APPADLPDGA VRIGVYLREH HQAWPWPESR WRWVDTAMAA VTAQRWFVDA AGLANALAGA
ARVRSVDDPH LTRWLRPVAQ LDAAPTLFPP VARRCESFSQ WWTRATRGLH HAEELLCSRD
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