| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1245 |
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| Symbol | |
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| ID | 6163921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1333276 |
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| End bp | 1334379 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663999 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_001790279 |
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| Protein GI | 171057930 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0291096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCA TGAACCTCCT GCACACCCCC ATCCAGATCG GCAACCTCAC GCTGTCGAGC
CGCCTCGCCA TGGCCCCGCT GACGCGCAAC CGCGCGGTCG GGCGCGTCCC CAACGACCTG
ATGGTCGACT ACTACCGCCA GCGCGCCAAT CCGGCCACCG GTGCGGCGCT GATCATCACC
GAGGCCAGCC AGATCAGCCC GATGGGCCAG GGCTATCTCG ACACCCCGGG CATCTACAGC
CCCGAGCAGA TCGCCGCCTG GCGCCGCGTG ACCGACGCGG TACACGCGCA AGGCGGGCGA
ATCGTGATCC AGCTCTGGCA CGTGGGCCGC ATCTCGCACG TGTCGCTGCT GCCCGAGGGC
GAAGTGCCGG TGTCGTCGAC CGCCCGCGCT GCCGTCTCCA AGACCTACAT CGCCAGCGGT
TTCGCCGACG TCTCGGCGCC GCGTGCGCTG CGCACCGACG AACTGCCCGG CCTGGTGAAC
GACTACCGCC ACGCCGCCCG CTGCGCGATC GAGGCGGGCT TCGACGGCGT CGAGATCCAT
GCCGCCAACG GCTACCTGCT CGAACAGTTC CTGCGCGACA GCATCAACGA CCGCACCGAC
GCCTACGGCG GCTCGATCGC CAACCGCATC CGCCTGCTCG GCGAGGTGAT GGACGCGGTG
GTGGCCGAGA TCGGCGCGGC GCGCACGGCG GTTCGCCTGA GCCCCGTCAC CCCCTCGAAC
GACGCCGCAC CCGACAGCGA CCCGCAGGCG CTGTTCAACG CCGTGGGCGA CAGGCTCGCG
CCGCTGGGCC TGATGTACGT GCACGTGGTC GAGGGCCAGA CCGGCGGCGC GCGCGATATC
GCCGCGTTCG ACTACGCCGA GCTGCGCCGT CGCATCGGCG CGCCGTGGAT GGTCAACAAC
GGCTACAGCG CCGCGATGGC CGAAGCCGCG GTGGCCGAGG GCCGCGCCGA CCTGGTGGCG
TTCGGCCGCC CGTTCATCGC CAACCCCGAC CTCGGCCTGC GCCTGCGTGG CGGCCATCCG
TGGAACCCGC TGCAGGGCGA CAAGCTCTAC GGCGGCGGTG CCGCCGGTTA CACGGATTAC
CCGACCTGGT CGGCGGCGGG GTGA
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| Protein sequence | MPAMNLLHTP IQIGNLTLSS RLAMAPLTRN RAVGRVPNDL MVDYYRQRAN PATGAALIIT
EASQISPMGQ GYLDTPGIYS PEQIAAWRRV TDAVHAQGGR IVIQLWHVGR ISHVSLLPEG
EVPVSSTARA AVSKTYIASG FADVSAPRAL RTDELPGLVN DYRHAARCAI EAGFDGVEIH
AANGYLLEQF LRDSINDRTD AYGGSIANRI RLLGEVMDAV VAEIGAARTA VRLSPVTPSN
DAAPDSDPQA LFNAVGDRLA PLGLMYVHVV EGQTGGARDI AAFDYAELRR RIGAPWMVNN
GYSAAMAEAA VAEGRADLVA FGRPFIANPD LGLRLRGGHP WNPLQGDKLY GGGAAGYTDY
PTWSAAG
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