| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1234 |
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| Symbol | |
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| ID | 6163958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1320882 |
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| End bp | 1321394 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663988 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001790268 |
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| Protein GI | 171057919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTCCA AGTCCCGTTC ATCCATCAGC CTGACGACCT GGCTGATGCT GGCCCTGCTG
GTCATCGTGG CCGACCAGCT CACCAAGGTG CTGATCGTCG CGCGCTTCGC CTACGGCGAC
AGCGTCACGC TGACGGGCTA CTTCAACCTG GTGCGGGTGC ACAACACCGG CGCGGCGTTC
AGCTTCCTGG CCGACGCCGC GGGCTGGCAG CGCTGGTTCT TCATCACGCT GGGCATCGCC
GCGTCGGGCA TGTTCATCTG GCTGCTCCGA TCGCACGCCA GCCAGAAGCT GTTCGCCTTC
TCGGTGTCGA TGCTGCTGGG CGGTGCGATC GGCAACGTGA TCGACCGCGC CTGGCACGGC
TACGTGGTCG ACTTCCTGCA GTTCCATTGG GACTTCCTCG CGCCGATCTT TCCGGGCGGC
TACTTCCCGT CCTTCAACGT GGCCGACTGC GCCATCACGG CCGGCGCGAT CGGGCTGATC
CTCGACGAGA TCGGGCGCGT GCGGCGCAGC TGA
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| Protein sequence | MRSKSRSSIS LTTWLMLALL VIVADQLTKV LIVARFAYGD SVTLTGYFNL VRVHNTGAAF
SFLADAAGWQ RWFFITLGIA ASGMFIWLLR SHASQKLFAF SVSMLLGGAI GNVIDRAWHG
YVVDFLQFHW DFLAPIFPGG YFPSFNVADC AITAGAIGLI LDEIGRVRRS
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