| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1228 |
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| Symbol | |
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| ID | 6163928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1313935 |
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| End bp | 1314918 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663982 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001790262 |
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| Protein GI | 171057913 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGTG CGATCCAGAT CCAGCAGTTC GGCGGCCCCG AGGTGATGCA GCTGGTCGAC
CTGACGGTGG GCGAGCCCGG CCCGGGCGAG GTGCGCATCC GCCACCACGC CGCCGGGCTG
AACTTCATCG ACGTCTACCA GCGCACCGGC CTCTATCCGA ACGCCCTGCC GCTGGCGCTG
GGCATGGAAG GCGCGGGCAT CGTCGAGATG GTGGGCGAGG GTGTCACCCA CCTGCAGGAA
GGCGACCGCG TCGCCTACGC CAGCCAGCCG CCCGGCAGCT ACTGCGAGGC GCGCGTGATG
CCGGCCAAGT GCGTGGTGCA ACTGCCCGAC GGCATCGATT TCGAGACCGG CGCGGCCATG
ATGCTCAAGG GCCTGACGGT GCAGTACCTG CTGCGCAGCA CCCAGCCGCA GGGCGGGCTG
AAGCCCGGCG ACACGATCCT GTTCCACGCC GCCGCCGGCG GTGTCGGCCT GATCGCCTGC
CAGTGGGCGC GCGCGATGGG CCTGAACCTG ATCGGCACCG CCGGCAGCCC CGAGAAGTGC
GCGCTCGCGC TCGAGATGGG CGCCAGCCAC GCCATCAACT ACCGAACCGA AGACTTCGTG
GCCCGCGTCA AGGAGATCAC CGGCGGACGC GGCGTCAAGG CGGTCTACGA CTCGATCGGC
CGCGACACCT TCGCGGGCTC GCTCGACTGT CTGGCGCCGT TCGGCCTGCT GGCCGTCTAC
GGCAACGCCT CGGGGCCGGT GGATGCGTTC AACCTCGGCC TGCTGGCCGC CAAGGGCTCG
CTGTACGTGA CGCGGCCCAC GCTGTTCACC CACATCGCCA CCCGCGAGCG CACCCAGGAG
ATGGCCGACG ACCTGTTCGG CATGGTCGCC AGCGGCGCGG TCCGGATCCG CATCGACCAG
CGTTACGCGC TGGCCGACGT GGCGCAGGCG CACCGTGATC TCGAAGCGCG CAAGACCACC
GGTTGCAGCG TCCTGACGCT CTGA
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| Protein sequence | MTRAIQIQQF GGPEVMQLVD LTVGEPGPGE VRIRHHAAGL NFIDVYQRTG LYPNALPLAL
GMEGAGIVEM VGEGVTHLQE GDRVAYASQP PGSYCEARVM PAKCVVQLPD GIDFETGAAM
MLKGLTVQYL LRSTQPQGGL KPGDTILFHA AAGGVGLIAC QWARAMGLNL IGTAGSPEKC
ALALEMGASH AINYRTEDFV ARVKEITGGR GVKAVYDSIG RDTFAGSLDC LAPFGLLAVY
GNASGPVDAF NLGLLAAKGS LYVTRPTLFT HIATRERTQE MADDLFGMVA SGAVRIRIDQ
RYALADVAQA HRDLEARKTT GCSVLTL
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