| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1223 |
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| Symbol | |
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| ID | 6160795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1308308 |
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| End bp | 1309732 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663977 |
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| Product | peptidase U62 modulator of DNA gyrase |
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| Protein accession | YP_001790257 |
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| Protein GI | 171057908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC TCGACAGCGC CGCTTCTTCG TCCTCGTCCT CGTCCGCGTC GACGTCCAAC
ACCACTTCGA GCCAGGGTTT CGCCTACAGC CGCGAGCAGT TCCAGCAACT GGTCGAAGAC
TCGCTGGCGC TGGCCCGCGA GCTCGGTGCC AGCGACGCCG GTGTCGAGGT CTCCGAAGGC
GCCGGACTGT CGGTGTCGGT GCGCAAGGGC GAGATCGAGA ACGTCGAGCG CAACCGCGAC
AAGGCGATCG GCGTGACGGT CTACATCGGC CAGCGCCGCG GCAACGCCAG CACCTCCGAT
TTCGCCCCCG CCGCCTTGCG CCAGACCGTG CAGGCGGCCT ACGACATCGC CCGCTTCACC
GCCGAGGACA GCGCCGCCGG CCTGCCCGAC GCCGCCGACC TGGCGCTGGG TGACGCCGCG
GTGCGTGACC TCGGGCTGTT CCATCCTTGG GCGATCGACG CCCAGACCGC CAGCGAGATC
GCGCTGCGCT GCGAGGCCGC GGCGCTGTCG GTCGACAAGC GCATCACCAA TTCCGAGGGC
GCGGCGGTGT CGGCCCAGCA GTCGCACTTC TTTGCCGGCA ACAGCCGTGG TTTCCGCGGC
GGCTATTCGA GTTCGCGCCA TTCGCTGTCG GTCTCGCCGA TCGCCGGGCG CGGCCGCGAC
ATGCAGCGCG ACGCCTGGTA CAGCTCGATG CGCGATGCGC TCGACCTGAG CTCGCCCGAA
TCGGTCGGCC GCTACGCCGC CGAGCGGGCG CTGTCGCGCC TGAAGTCGCG CAAGATCAAG
ACCTGCGAGG TGCCGGTGCT GTTCGAGGCG CCGGTGGCCG CCGGCCTGCT GGGTGCCTAC
GTCAACGGCA CCAGCGGCGG CTCGCTCTAC CGCAAGGCGA GCTTCCTGCA GGACAGCCTC
GGCCAGGCGA TCTTCCCGAG CCACATCGAC GTGCGCGAGG ATCCGCACAT CCCCAAGGGC
AAGGGCAGCG CGCCGTTCGA CGACGAAGGC GTGCTGACGC GCGCGCGCAC CGTGGTCGAG
GCCGGCGTCA CGCTCGGTTA TTTCCTGTCG AGCTATTCGG CGCGCAAGCT CGGCATGCAC
ACCACCGGCC ACGCCGGCGG CTCGCAGAAC CTGACGCTGA CCAGCCGCCT GACGCGTCGC
GGCGACGACC TGCCGGCGAT GCTGCGCAAG CTGCACCGCG GCCTGTTCGT GGTCGAGCTG
ATGGGCCAGG GCGTCAACTA CGTGACGGGC GACTACTCGC GTGGCGCGGC GGGTTTCTGG
GTCGAGAACG GCGAGATCGC CTTCCCGGTC GAGGAGATCA CCATCGCCGG CAATCTGCGC
GACATGCTGG CCCGGATCGT CGCGGTCGGC GCCGACACCT ACAACGCCGG CAGCAAGACG
ATGGGCTCGG TGCTGGTCGA GCGCATGACC ATCGCCGGGC ACTGA
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| Protein sequence | MTTLDSAASS SSSSSASTSN TTSSQGFAYS REQFQQLVED SLALARELGA SDAGVEVSEG
AGLSVSVRKG EIENVERNRD KAIGVTVYIG QRRGNASTSD FAPAALRQTV QAAYDIARFT
AEDSAAGLPD AADLALGDAA VRDLGLFHPW AIDAQTASEI ALRCEAAALS VDKRITNSEG
AAVSAQQSHF FAGNSRGFRG GYSSSRHSLS VSPIAGRGRD MQRDAWYSSM RDALDLSSPE
SVGRYAAERA LSRLKSRKIK TCEVPVLFEA PVAAGLLGAY VNGTSGGSLY RKASFLQDSL
GQAIFPSHID VREDPHIPKG KGSAPFDDEG VLTRARTVVE AGVTLGYFLS SYSARKLGMH
TTGHAGGSQN LTLTSRLTRR GDDLPAMLRK LHRGLFVVEL MGQGVNYVTG DYSRGAAGFW
VENGEIAFPV EEITIAGNLR DMLARIVAVG ADTYNAGSKT MGSVLVERMT IAGH
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