Gene Lcho_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1202 
Symbol 
ID6161152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1289588 
End bp1289950 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID641663956 
ProductNIPSNAP family protein 
Protein accessionYP_001790236 
Protein GI171057887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC TGGATGCACT CGGCGTGAGC GCCGGCAAGG TGCTGATCGA CCACCGCATC 
TACACCATCG TGCTGCGCAA GATGCCCGAA TTCATCGAGG TATTCGACCG CTTGGCAATG
CCGATCCTGC TCGAGACGCT GGGCCATCCG CTGGGCTTCT GGACCAGCCT GGTCGGGCCG
CAGAACCAGT TCGTGCACCT GTGGGGCTAC GACAGCCTGG CCGACTACGA ACAGCGTTGC
CGGGCCCGCG ACACGCACCC GGATTTCCCG AAATACCTGG CCGCGTCGGG CCACCTGATC
ACCGCGCAGG AGACGCGCCT GATCCGCCGC GCCGAGCTAT CGAGCATGAA GGGGTTGGCA
TGA
 
Protein sequence
MSGLDALGVS AGKVLIDHRI YTIVLRKMPE FIEVFDRLAM PILLETLGHP LGFWTSLVGP 
QNQFVHLWGY DSLADYEQRC RARDTHPDFP KYLAASGHLI TAQETRLIRR AELSSMKGLA