| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1199 |
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| Symbol | |
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| ID | 6160966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1285956 |
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| End bp | 1286888 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663953 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001790233 |
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| Protein GI | 171057884 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCT CCATCCCGAA CTACGCGCTG TATGGCGAAG AGGCCCAGCC GGCCTGGCTG
GACATGGTCC ATTTCGAGAT GATTCACGAG CGCTCGTCGC TCTTCAAGTT CGAGATCGAC
CCGCATTTCC ACGAGGGCCT GATCCAGCTG CTCTACGTCA CCCACGGCGG CGGCGAGGCC
TTCATCGACG GCACGAACTG GCAGGTGCAT CCGCAGTCGC TGATCGTGGT GCCGGCGCGC
CATGTGCACG GTTTCCACTT CACGCACGAC ATCGACGGGC CGGTGGTGAC CGCCGCGCAG
AGCCCGCTCG AATCGCTCGC CAGCGTGGGC GCGCCCGACC TGCTGGCGCA CATCCGCCGG
CCGCAGGTGC TGAGCGTCGG CGATGCGGTG CGGCACGTCG ATGCGCTGAT GCCGCTGTTC
GACGCGATCC AGCGCGAGGC CCGCGTGCAC GGCAGCGGCG AGGTGGCGGC CGGCTCGGCG
CTGCTGATGG CGGTGTTCGT GCAGATCGCG CGCATCTCCG CCACGCTGCA GTCGCAGGAA
GGGCCGGACA CCCACGGCCG TTCGCGCAAG GCGGCGCAGG TGGAGCGCTT CCGCGCATTG
GTCGACGCCC ACTTCCGCAA GCGCCTCGGG ATCGAGTTCT ATGCCGCCGA GATGGGCCTG
AGCGCGGGGC AGTTGTCGCG GCTGTGCCGT GATGCGCTGG GCATGTCGAG CCTCGACGTG
CTCAACGCCC GCGTGGTGCA CGAGGCCAAG CGCGAGCTGG TCTATTCGAC GCTCGGCATC
AAGCAGATCG CGGCGGTGCT CGGTTTTGCC GACGAGGCCT ATTTCGGCCG CTTCTTCAAG
AAGCAGATCG GCCGCACGCC CACCGAGTTC CGCGACGCCG CGCGGCTGCG GCTGACACCC
GAGGCCAAGG GCCGGGCCAC GGTGGAACCG TGA
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| Protein sequence | MSSSIPNYAL YGEEAQPAWL DMVHFEMIHE RSSLFKFEID PHFHEGLIQL LYVTHGGGEA
FIDGTNWQVH PQSLIVVPAR HVHGFHFTHD IDGPVVTAAQ SPLESLASVG APDLLAHIRR
PQVLSVGDAV RHVDALMPLF DAIQREARVH GSGEVAAGSA LLMAVFVQIA RISATLQSQE
GPDTHGRSRK AAQVERFRAL VDAHFRKRLG IEFYAAEMGL SAGQLSRLCR DALGMSSLDV
LNARVVHEAK RELVYSTLGI KQIAAVLGFA DEAYFGRFFK KQIGRTPTEF RDAARLRLTP
EAKGRATVEP
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