| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1198 |
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| Symbol | |
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| ID | 6160965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1284725 |
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| End bp | 1285930 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663952 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001790232 |
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| Protein GI | 171057883 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAC ACGCCTTCAT CTGCGATGCC CAGCGCACGC CCTTCGGCCG CTACGGCGGT
GCGCTCTCGT CGGTGCGCAC CGATGATCTC GCCGCCATCC CGCTGCGCGC GCTGATGGCG
CGCAACGCCG CTGTCGACTG GTCGGCGGTG GCCGACGTGC TGTACGGCTG CGCCAACCAG
GCCGGCGAGG ACAACCGCAA CGTCGCCCGC ATGGCCGCGC TGCTGGCCGG TCTGCCGGTC
GACGTGCCCG GCGGCACGAT CAACCGCCTG TGCGGCTCGG GCATGGACGC GGTGGGCACG
GCGGCGCGGG CCATCCGCGC CGGCGAGGCC GAGCTGATGA TCGCCGGTGG CGTCGAGAGC
ATGAGCCGCG CGCCGTTCGT GATGCCCAAG GCCGAGAGCG CCTTCAGCCG CAACAACGCG
ATCCACGACA CCACCATCGG CTGGCGCTTC GTCAACAAGC TCATGAAGGC GCAGTACGGC
GTCGACTCGA TGCCCGAGAC CGCCGAGAAC GTGGCGCAGC AGTTCGGCAT CGAGCGCGCC
GCGCAGGACC GCATGGCGCT GGCCTCGCAG TTGAAGGCGG TCGCGGCGCA GCGCAGCGGT
TTCTTCGACG CCGAGATCAC ACCGGTGTCG ATCGCGCAGA AGAAAGGTGA CCCGATCGTC
GTCAACCAGG ACGAACACCC GCGCGAGACC TCGCTCGAAT CGCTCGCCAG GCTCAAGGGC
GTGGTGCGGC CCGATGGCAG CGTGACGGCG GGCAATGCCA GCGGCGTCAA CGACGGCGCC
TGCGCCTTGC TGCTGGCCAG CGAAGCGGCT GCCACCAAGA ACGGCCTCAC CCCACGCGCC
CGCGTGATCG GCATGGCCAC CGCCGGTGTC GAGCCGCGCA TCATGGGCAT CGGCCCGGCG
CCGGCCACCC GCAAGGTTCT GGCGCTGACC GGGCTGCGGC TCGACCAGCT CGATGTCATC
GAGTTGAACG AGGCCTTCGC GGCTCAAGGC CTGGCGGTGC TGCGCGACCT CGGCCTGGCC
GACGACGATG CACGCGTCAA TCCGAACGGC GGCGCGATCG CGCTCGGCCA CCCGCTGGGC
GCGAGTGGCG CGCGGCTGGT GATGACGGCG GTGAACCAGC TGCACCGCAT CCAGGGCCGC
TACGCGCTGT GCACGATGTG CATCGGCGTC GGCCAGGGCA TCGCGCTGAT CGTCGAGCGG
GTCTGA
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| Protein sequence | MTRHAFICDA QRTPFGRYGG ALSSVRTDDL AAIPLRALMA RNAAVDWSAV ADVLYGCANQ
AGEDNRNVAR MAALLAGLPV DVPGGTINRL CGSGMDAVGT AARAIRAGEA ELMIAGGVES
MSRAPFVMPK AESAFSRNNA IHDTTIGWRF VNKLMKAQYG VDSMPETAEN VAQQFGIERA
AQDRMALASQ LKAVAAQRSG FFDAEITPVS IAQKKGDPIV VNQDEHPRET SLESLARLKG
VVRPDGSVTA GNASGVNDGA CALLLASEAA ATKNGLTPRA RVIGMATAGV EPRIMGIGPA
PATRKVLALT GLRLDQLDVI ELNEAFAAQG LAVLRDLGLA DDDARVNPNG GAIALGHPLG
ASGARLVMTA VNQLHRIQGR YALCTMCIGV GQGIALIVER V
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