Gene Lcho_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1196 
Symbol 
ID6160963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1282432 
End bp1283217 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID641663950 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001790230 
Protein GI171057881 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC TGAAGATCAC GCGCAGCGCC ACCGGCGTGG CGCAGGTGAC GATGGCTCGA 
CCGGAGGTGT TCAACGCCTT CGACGAGCTG ATGATTACCG AGCTGGATGC GGCCTTTGCA
CAACTGGGCG CCGACGACGC CGTGCGCGTG ATCGTGCTGG CCGGCGAGGG CAAGGCCTTC
TCGGCCGGCG CCGATCTGCA GTGGATGCAG CGCGCCAGCG AGGCCAGCAT CGAGTGGAAC
CTCGCCGACG CGCGCCGTCT GGCGGCGATG CTGTGGCGCA TCGACTCCTG CCCCAAGCCG
ACCATCGCGC GTGTGCACGG CATCGCGCTC GGCGGCGGCG TGGGGCTGAC CTGCGCGTGC
GACATCGCGG TGGCCAGCCA GAACGCCAGC TTCGCGGTCA GCGAGGCCAA GTTCGGCATC
CTGCCCGCCA CCATCGGCCC CTACGTGATC AACGCCGTGG GCAAGCGCCA CGCCCGCCGC
CTGGCGCTGA CGACGCGCCG CATCGGTGCC GACGAGGCGC TCGGCATGGC GATGGTGCAC
CAGGTGGTCG CGCCCGATGC GCTCGATGCC GCGATCGACG AACAGGTGCA GGCGCTGTGC
GCCAACGGCC CGCAGGCACT GGCGGAGATC AAGGCGCTGT TCGCGCAATT GTCCGAAGGA
CCGGTGACGC CCGAGGTGCG CGAACTGACC GCGTTGACCA TCAGCCGCGT GCGCGGCACC
GACGAGGCGC GCGAAGGTTT TGCGGCCTTT CTCGGCAAGC GGCCGGCCGC GTGGATCAAG
GAATGA
 
Protein sequence
MKTLKITRSA TGVAQVTMAR PEVFNAFDEL MITELDAAFA QLGADDAVRV IVLAGEGKAF 
SAGADLQWMQ RASEASIEWN LADARRLAAM LWRIDSCPKP TIARVHGIAL GGGVGLTCAC
DIAVASQNAS FAVSEAKFGI LPATIGPYVI NAVGKRHARR LALTTRRIGA DEALGMAMVH
QVVAPDALDA AIDEQVQALC ANGPQALAEI KALFAQLSEG PVTPEVRELT ALTISRVRGT
DEAREGFAAF LGKRPAAWIK E