Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1196 |
Symbol | |
ID | 6160963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1282432 |
End bp | 1283217 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641663950 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001790230 |
Protein GI | 171057881 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACGC TGAAGATCAC GCGCAGCGCC ACCGGCGTGG CGCAGGTGAC GATGGCTCGA CCGGAGGTGT TCAACGCCTT CGACGAGCTG ATGATTACCG AGCTGGATGC GGCCTTTGCA CAACTGGGCG CCGACGACGC CGTGCGCGTG ATCGTGCTGG CCGGCGAGGG CAAGGCCTTC TCGGCCGGCG CCGATCTGCA GTGGATGCAG CGCGCCAGCG AGGCCAGCAT CGAGTGGAAC CTCGCCGACG CGCGCCGTCT GGCGGCGATG CTGTGGCGCA TCGACTCCTG CCCCAAGCCG ACCATCGCGC GTGTGCACGG CATCGCGCTC GGCGGCGGCG TGGGGCTGAC CTGCGCGTGC GACATCGCGG TGGCCAGCCA GAACGCCAGC TTCGCGGTCA GCGAGGCCAA GTTCGGCATC CTGCCCGCCA CCATCGGCCC CTACGTGATC AACGCCGTGG GCAAGCGCCA CGCCCGCCGC CTGGCGCTGA CGACGCGCCG CATCGGTGCC GACGAGGCGC TCGGCATGGC GATGGTGCAC CAGGTGGTCG CGCCCGATGC GCTCGATGCC GCGATCGACG AACAGGTGCA GGCGCTGTGC GCCAACGGCC CGCAGGCACT GGCGGAGATC AAGGCGCTGT TCGCGCAATT GTCCGAAGGA CCGGTGACGC CCGAGGTGCG CGAACTGACC GCGTTGACCA TCAGCCGCGT GCGCGGCACC GACGAGGCGC GCGAAGGTTT TGCGGCCTTT CTCGGCAAGC GGCCGGCCGC GTGGATCAAG GAATGA
|
Protein sequence | MKTLKITRSA TGVAQVTMAR PEVFNAFDEL MITELDAAFA QLGADDAVRV IVLAGEGKAF SAGADLQWMQ RASEASIEWN LADARRLAAM LWRIDSCPKP TIARVHGIAL GGGVGLTCAC DIAVASQNAS FAVSEAKFGI LPATIGPYVI NAVGKRHARR LALTTRRIGA DEALGMAMVH QVVAPDALDA AIDEQVQALC ANGPQALAEI KALFAQLSEG PVTPEVRELT ALTISRVRGT DEAREGFAAF LGKRPAAWIK E
|
| |