| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1192 |
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| Symbol | |
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| ID | 6162972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1277799 |
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| End bp | 1279484 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663946 |
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| Product | electron-transferring-flavoprotein dehydrogenase |
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| Protein accession | YP_001790226 |
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| Protein GI | 171057877 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC AGCAGTTGCT CGATCAACAC GGCCCGCGCG AGGCGATGGA CTACGACGTC
GTGGTCGTCG GCGGCGGCCC GGCCGGCCTG GCCACGGCGA TCCGGCTCAA GCAGCGGGCC
GCCGCGGCCG GCGCCGAGCT GTCGGTGGTC GTGCTCGAAA AGGGCAGCGA GCCCGGCGCC
CACACGTTGA GCGGCGCCGT GATGGACCCG CGTGCGCTGA CCGAGCTGTT CCCCGACTGG
CAGCAGCGCG GCGCGCCGCT GCATCAGCCA GTCAGCGCCG ACGAGGTGCT GTTCCTGAGC
GAGACCGGCG CGAAGAAGAC ACCCGCCTGG CTGGTGCCCG ACTGCTTCCA CAACCACGGC
AACCACGTCA TCAGCCTGGG CGCGTTGACG AAGTGGCTGG GCGAGCAGGC CGAGGCACTG
GGCGTCGAGA TCTTCCCCGG CTTCAGCGCC GCCGAGGTGC TGTACGACGA ACGCGGCGCG
GTGCGCGGCG TGGCCACCGG CAACGTCGGC ATCGGCCGCG ACGGCCAGCC GCACGACGGC
TTCCAGCTCG GCATGGAGTT GACGGGCAAG TACACCGTGT TCGCCGAAGG CGCGCGCGGC
CACCTCGGCC GGCAGCTGAT CGAGCGCTTC CAGCTCGACG CCGGCCGCGA TCCGCAGAGC
TACGCGCTGG GCATCAAGGA ACTGTGGGAG ATCGATCCGG CGAAGGCGAA GCCCGGGCTG
GTGGTGCACA CCGCCGGCTG GCCGATGGCG AGCGACACCT ATGGCGGCGG CTTTCTGTAC
CACCTCGAAG GCAACCGGGT CACGCTCGGC TTCGTCACCG GGCTGGACTA CAAGAACCCG
TGGCTGAGTC CGTTCGAGGA GATGCAGCGC TGGAAGACCC ACCCGGCCAT CCGCGCCCAC
CTCGAAGGCG GCAAGCGCAT CGGCTACGGC GCCCGCGCCA TCACCGCGGG CGGCCTGCTG
AGCCTGCCCA AGCTGGTGTT CCCGGGCGGT GCGCTGGTCG GCTGCGAGGC TGGCACGCTG
AACGCTGCGC GCATCAAGGG CAGCCACGCC GCGATCAAGA CCGGCATGCT GGCCGCCGAA
GCCGCGTTCG ACGCGCTGCA GGCCGGCCGC GCCCACGACG AACTGGCGGC CTACCCGGCG
GCGTTCGAGC AGAGCTGGCT GCATGCCGAG TTGAAGCAGT CGCGCAACTT CAAGCAGTGG
TTCAAGAAGG GCAACACGGT CGGCGCGCTG ATGACGGGCA TCGAGCAGTG GCTGCTGCCC
AAGCTGGGCG TGCAGAGCCC GCCGTGGACG ATCCACCGCC AGCAGGCCGA TCACCTGCAT
CTGCAGCCGG CTGCCGCGAT GCCGCAGATC GCCTATCCCA AGCCCGACGG CCAACTCACC
TTCGACCGGC TCAGCTCGGT GTTCATCAGC AACACCAACC ACGAAGAGAA CCAGCCCGCG
CACCTGACGC TCAAGGACGC TGCCGTGCCG GTCAACCTCA ACCTGGCCCG CTACGCCGGG
CCGGAGAGCC GCTACTGCCC GGCCGGCGTC TACGAGTTCG TCAAGAATGA CGACCAGACG
GACCGGCTGC AGATCAACGC GCAGAACTGC GTGCACTGCA AGACTTGCGA CATCAAGGAC
CCGACGCGCA ACATCGTCTG GGTCACCCCC GAGGGCGGCG GCGGCCCGAA CTACGCCGGC
ATGTAG
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| Protein sequence | MTPQQLLDQH GPREAMDYDV VVVGGGPAGL ATAIRLKQRA AAAGAELSVV VLEKGSEPGA
HTLSGAVMDP RALTELFPDW QQRGAPLHQP VSADEVLFLS ETGAKKTPAW LVPDCFHNHG
NHVISLGALT KWLGEQAEAL GVEIFPGFSA AEVLYDERGA VRGVATGNVG IGRDGQPHDG
FQLGMELTGK YTVFAEGARG HLGRQLIERF QLDAGRDPQS YALGIKELWE IDPAKAKPGL
VVHTAGWPMA SDTYGGGFLY HLEGNRVTLG FVTGLDYKNP WLSPFEEMQR WKTHPAIRAH
LEGGKRIGYG ARAITAGGLL SLPKLVFPGG ALVGCEAGTL NAARIKGSHA AIKTGMLAAE
AAFDALQAGR AHDELAAYPA AFEQSWLHAE LKQSRNFKQW FKKGNTVGAL MTGIEQWLLP
KLGVQSPPWT IHRQQADHLH LQPAAAMPQI AYPKPDGQLT FDRLSSVFIS NTNHEENQPA
HLTLKDAAVP VNLNLARYAG PESRYCPAGV YEFVKNDDQT DRLQINAQNC VHCKTCDIKD
PTRNIVWVTP EGGGGPNYAG M
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