| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1188 |
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| Symbol | |
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| ID | 6163489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1273092 |
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| End bp | 1274735 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663942 |
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| Product | cyclohexanecarboxylate-CoA ligase |
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| Protein accession | YP_001790222 |
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| Protein GI | 171057873 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCG ACACCGTCCT GCTGCCGCCG CGCCGCGCCG CCAGCGTGGC CGCAGGCCAC
TGGTTCGACC GCACCATCAA CGACGACCTC GACGCCTGCG TGGCAGCCTG TCCCGACAAG
GTCGCGCTGA CGGCGGTGCA GGTCGAGTCC GGCGAGGTCC GGCGCTTCAC CTACCGCGAA
CTGGCTGCGA TGGCCGATCG CGTGGCGGTC GGTCTGTCGC GTCTGGGCGT GGGTCGCAAC
GACGTGGTGG CGATGCAGCT GCCCAACGGG TGGCAGTTCA CCGTCGTCTA CCTGGCCTGC
TCGCGCATCG GCGCGGTGGT CAATCCGCTG ATGCACATCT TCCGCGAGCG CGAGCTGACC
TTCATGCTCG GGCACGGCGA GGCCAAGGTG CTGATCGTGC CCAAGACCTT CCGCGGTTTC
GATCACGAGC GCATGGTCGA CACCATCCGG CCCGACCTGC CGAAGCTGCA GCAGGTGGTG
GTGGTCGGCG GCAGCGGCGC CAACAGCTTC GAGGCGCTGC TCTGCGGCCC GGCCTGGGAG
AACGAGCCCG ATGCGCACGA GGTCCTGACC CGCAGCCGCC CCGGCCCCGA CGACGTCACC
CAGCTGATCT ACACCTCGGG CACCACCGGC GAGCCCAAGG GCGTGATGCA CACCGCCAAC
ACGGTGATGG CCAACATCAT TCCGTACGCC GAGCGGCTGC ACCTGGGCAG CGACGACGTG
GTGCTGATGG CTTCGCCGAT GGCGCACCAG ACCGGCTTCA TGTACGGCCT GATGATGCCC
ATCATGCTGC GCGCCAGCGC CGTGCTGCAG GACCTCTGGG ACGCCCGGCG CGCCGTCGAG
CTGATCCGCA GCGAGGGCGC CACCTTCACG ATGGCTTCGA CGCCGTTCCT GAGCGACCTG
GCCAAGACCG TCGCCGAAAC CGGCACCTCG GTGCCGACGC TGCGCACCTT CCTGTGTGCC
GGCGCACCCA TCCCCGGCGC ACTGGTCGAG CAGGCGCGCA AGGTACTCGG GACAAAAATC
GTGTCGGCCT GGGGCATGAC CGAAAACGGC GCCGTCACGC TGATCAAGCT CGACGACGAC
GACCAACGCG CCTTCACCAC CGACGGCTGC CCGCTGCCGG GCGTCGAGCT CAAGGTGGTC
GATGCCGACG GTGCCGAACT GCCGGCCGGA CAGGCGGGCA AGCTGCTGGT GCGCGCGGCA
TCGAACTTCG GCGGCTACCT GCACCGCCCG CAGTGGAACG GCACCGACGC CGACGGCTGG
TTCGACACCG GCGACCTGGC GCGCATCGAC GCGCAGGGCT ACATCCGCAT CAGCGGGCGC
AGCAAGGACG TGATCATCCG CGGCGGCGAG AACATCCCGG TGGTCGAGGT CGAGGCGCTG
CTGTACCGCC ACCCCGCGGT GGCGCAGGTG GCGATCGTGG CCTACCCCGA CGAGCGGCTC
GGCGAGCGCG CCTGCGCGTT CATCACTACC AAGCCGGGCC AGAGCCTCGA TTTCGCCGGC
ATGGTCGAGT TCCTGAAGGC CCAGAAGCTC GCCATCCAGT ACATCCCCGA GCGCCTGGTG
GTGCGGGACG CGTTGCCGTC CACGCCCTCC GGAAAGCTGC AGAAATTCAA GCTGCGCGAG
ATGGTGCGCG ACGGCTCGAT CTGA
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| Protein sequence | MNFDTVLLPP RRAASVAAGH WFDRTINDDL DACVAACPDK VALTAVQVES GEVRRFTYRE
LAAMADRVAV GLSRLGVGRN DVVAMQLPNG WQFTVVYLAC SRIGAVVNPL MHIFRERELT
FMLGHGEAKV LIVPKTFRGF DHERMVDTIR PDLPKLQQVV VVGGSGANSF EALLCGPAWE
NEPDAHEVLT RSRPGPDDVT QLIYTSGTTG EPKGVMHTAN TVMANIIPYA ERLHLGSDDV
VLMASPMAHQ TGFMYGLMMP IMLRASAVLQ DLWDARRAVE LIRSEGATFT MASTPFLSDL
AKTVAETGTS VPTLRTFLCA GAPIPGALVE QARKVLGTKI VSAWGMTENG AVTLIKLDDD
DQRAFTTDGC PLPGVELKVV DADGAELPAG QAGKLLVRAA SNFGGYLHRP QWNGTDADGW
FDTGDLARID AQGYIRISGR SKDVIIRGGE NIPVVEVEAL LYRHPAVAQV AIVAYPDERL
GERACAFITT KPGQSLDFAG MVEFLKAQKL AIQYIPERLV VRDALPSTPS GKLQKFKLRE
MVRDGSI
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