| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1180 |
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| Symbol | |
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| ID | 6161723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1264067 |
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| End bp | 1264894 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663934 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790214 |
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| Protein GI | 171057865 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.545681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACT GCATCGGCCT GCGGCTCAAC GCCGGCCTGG TTTTCCTGTC CGATTCGCGC
ACCAACGCCG GGCTCGATGC CATCAGCACC TTCCGCAAGA TGATCGTCTA CGAGAAGCCC
GGCGACCGCT TCATGTGCCT GCTGTCGGCC GGCAACCTGA GCATCTCGCA GTCGGTGCGC
GAGATCCTGC AGGTCGAGAA GATCCCCGGC GCCGAGGGCG AGGAGGCGAT CTCGATCTGG
AACGCCAAGA GCATGTTCGA CGTCGCCCGC GTGCTGGGCT CGGCGGTGCG CCGCATCCAC
GACCAGGACG GCCCGTCGCT GCGCGCCGCC GGCATCGACT TCGTCGCCAG CTTCATCCTC
GGCGGCCAGA TCGGCGGCGA GGCGATGCGG CTGTTCCTGG TCTATTCGGC CGGCAACTTC
ATCGAGGCGA CCCGCGAGAC CTGCTTCTTC CAGATCGGCG AGAGCAAGTA CGGCAAGCCG
ATCCTCGACC GCGTGCTGAC ACCGCACACC CCGCTCGACG AGGCCGCCAA GTGCGCGCTG
GTGTCGATGG ATTCGACCCT GAAATCCAAT CTCAGCGTCG GCCTGCCGCT GGACCTGCTG
GTCTATCGCG CCGACTCGCT GAGCGCCGAC CAGGTGGTCT GCATCGACGA CAAGAACCCG
TATTTCCAGA TGATCCACAA CACCTGGGGC CAGCGCCTGC GCGAGGTGTT CGAGGGCATC
GACGATCCGC GCTGGGACGG CGGCGACGCC ACGCACCCGC TGATGGTGGA ATCCGAGCGG
TTCGATCCGA TGAAGAAGAT CGGCCACGCC AGCGAGAAGA TCGTCTGA
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| Protein sequence | MTYCIGLRLN AGLVFLSDSR TNAGLDAIST FRKMIVYEKP GDRFMCLLSA GNLSISQSVR
EILQVEKIPG AEGEEAISIW NAKSMFDVAR VLGSAVRRIH DQDGPSLRAA GIDFVASFIL
GGQIGGEAMR LFLVYSAGNF IEATRETCFF QIGESKYGKP ILDRVLTPHT PLDEAAKCAL
VSMDSTLKSN LSVGLPLDLL VYRADSLSAD QVVCIDDKNP YFQMIHNTWG QRLREVFEGI
DDPRWDGGDA THPLMVESER FDPMKKIGHA SEKIV
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