| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1179 |
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| Symbol | |
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| ID | 6161722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1262800 |
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| End bp | 1264035 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663933 |
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| Product | cellulose biosynthesis protein CelD |
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| Protein accession | YP_001790213 |
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| Protein GI | 171057864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.60809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG ATCTGAAAGC CATCCAGCGG GTCGCGCCGC AAGGGGTGAA CGAGGCGAAC
CTGCAGCTTC GCTGCCTGCG GTTGCAGGAT CTCGGGCCGG CCGAGATCGC CGCCTGGCGC
GCGCTGGACG AACAGGCGCT GGAGCCCAAT CCCTACCTGT CGCCGCAGTT CCTGCTGCCG
GTGATGCGCC ATCTCGACCC GAAAGGGCAG ATCGTGCTGG CCGTGGTCGA GTCCGGCGAC
CCGCGGCGGC GGGAGCTGTG CGCGCTCGCG CCGTTGCTGT CGACCGAGGC CAGCCGCTAC
CTGCCGTTGA CACACTGCCG CCTGCAGGCG TCGCTGCATT CCTTTCTCAA CGGCGTGCTG
GTGCGGCGCA CGGATGCGCG GCGCCATCTC GAAGCCCTGG TCGATCAGGG GCGGCGCTAC
ATGGGCCACG GCCTGGTGCT CGAGGCCTGC CGGGCCGACG GCCCGACCGA CGCCCTGCTG
CGGGAGATCG CCGCCGAGCG CGACATGCGC CGCGTCGAGG TCGAGGCCTA TCTGCGCGCC
GGCATGCGCC CGGCCGACAT GGGCGAGGCC GACCTGGCCG CCCGCCTGCC GTCCAAGGCC
AAGAAGCTGC GGTCCTGCAT GAGGAAACTG GCGAAGTTCG GCGAGGTCGA TTTCCGGGTG
TGGCGCGGGG CAGCGATCAC CGACGAGGTG ATCGAACGCC ACCTCGCCCT CGAGCACATG
GGCTGGAAGG GTGACAACGG CAGCTCGTTG CGCTCGCATC GCGCGCATGA AGACTTCTTC
CGCGAGATGG CGCGTGGTTT TGCGGCCGAC AATCGGGCCC TGTTCGCCGA GCTGTCGGTC
GGCGGGCGGG TGATCGCGTC GAGCAGCAAC CTGATCGCCG GCAACGTCGG TGCCGCGTTC
AAGATCGGCT TCGACCCCGA GTTCGCCGCG ATGGGCCCGG GCATCGTCTG CGAACTCGAG
CTGATGCGCT GCGCCCCGAC CGTGCTGGCC GACGTCGACC ATGTCGACAG CGGTTCGGTG
GCCGGCTCCT ACATCGAGGA CCTGTGGCCG CTGCGGCGCC GGATGGCCGC GGTCTGCTAC
TCCACCTCGC CGGTGGGCAA CTTGGCGCTG CTGGCGGTGA GCCAGCTGCG CAGCATCAAG
CGGCTCCTGC GTGACCCGCT GGCGGCGCCT GAAGCCGACG ACGCGGTCGC CACCGAGGTG
CGGGTGCCGG CCGCGCGGGG TGTCCTGCTG GACTGA
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| Protein sequence | MNNDLKAIQR VAPQGVNEAN LQLRCLRLQD LGPAEIAAWR ALDEQALEPN PYLSPQFLLP
VMRHLDPKGQ IVLAVVESGD PRRRELCALA PLLSTEASRY LPLTHCRLQA SLHSFLNGVL
VRRTDARRHL EALVDQGRRY MGHGLVLEAC RADGPTDALL REIAAERDMR RVEVEAYLRA
GMRPADMGEA DLAARLPSKA KKLRSCMRKL AKFGEVDFRV WRGAAITDEV IERHLALEHM
GWKGDNGSSL RSHRAHEDFF REMARGFAAD NRALFAELSV GGRVIASSSN LIAGNVGAAF
KIGFDPEFAA MGPGIVCELE LMRCAPTVLA DVDHVDSGSV AGSYIEDLWP LRRRMAAVCY
STSPVGNLAL LAVSQLRSIK RLLRDPLAAP EADDAVATEV RVPAARGVLL D
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