| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1177 |
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| Symbol | |
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| ID | 6163063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1260651 |
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| End bp | 1261511 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663931 |
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| Product | pantoate--beta-alanine ligase |
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| Protein accession | YP_001790211 |
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| Protein GI | 171057862 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0414] Panthothenate synthetase |
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| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.32495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCG TCCACACCCT CGCCGACCTG CGCGCCGCCC TGGCGCCGGT GCGCCGCAGC
GCCGGCACCA TCGCCTTCGT GCCCACGATG GGCAACCTGC ACGAGGGCCA TCTGGCGCTG
GTGCGTCAGG CCCGCGAACG TGTCGGCGCC GCCGGCACGG TGGTGGCGAG CATCTTCGTC
AACCGCCTGC AGTTCGCGCC GCACGAGGAT TTCGACCGCT ACCCGCGCAC GCTGGCACGC
GATGCCGAGC TGCTGGCCCC GGCCGGCTGC GACCTGGTGT TCGCGCCCGC CGAGGCCGAG
CTCTACCCGC AGCCGCAGAC CTTCAAGGTG CAGCCCGACC CGGCGCTGGC CGAGCTGCTC
GAAGGCCATT TCCGGCCCGG CTTCTTCACC GGCGTGTGCA CCGTCGTCAT GAAGCTGTTC
TCGATCGTGC AGCCGCAGGT CGCCGTGTTC GGCAAGAAGG ACTACCAGCA GCTGATGGTG
CTGCGCCGCA TGGTCGAGCA GTTCGCGCTG CCGATCGAGG TGCTCGGCGG CGAGACGCTG
CGCGCGCACG ACGGCCTGGC GCTGTCGTCG CGCAACGGCT ACCTCGGCGC GGCCGAACGC
GAGCAGGCGC TGCAGCTGTC GGCCGCCCTG CGCGACCTGC TGGGCGCGGT GCGCGCCGGT
GGCGCCCCGC TGGAGACGCT CGAAGCGCAG GCCTGCACGG CGCTGCGCGC GCAAGGCTGG
CTGCCCGACT ACCTGTGCGT GCGCCGCCGC ACCGACCTGC TGCCGCCCGG CGCCGACGAG
ATCGCCGCGG GCCTGCCGCT GGTCGCGCTC GGTGCGGCCA GGCTGGGCAA CACCCGGCTG
ATCGACAACC TCGAAGGCTG A
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| Protein sequence | MQIVHTLADL RAALAPVRRS AGTIAFVPTM GNLHEGHLAL VRQARERVGA AGTVVASIFV
NRLQFAPHED FDRYPRTLAR DAELLAPAGC DLVFAPAEAE LYPQPQTFKV QPDPALAELL
EGHFRPGFFT GVCTVVMKLF SIVQPQVAVF GKKDYQQLMV LRRMVEQFAL PIEVLGGETL
RAHDGLALSS RNGYLGAAER EQALQLSAAL RDLLGAVRAG GAPLETLEAQ ACTALRAQGW
LPDYLCVRRR TDLLPPGADE IAAGLPLVAL GAARLGNTRL IDNLEG
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