| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1171 |
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| Symbol | |
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| ID | 6162678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1253770 |
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| End bp | 1254897 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663925 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001790205 |
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| Protein GI | 171057856 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.829373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA TCCGACAAGA CGCCGCGCTG CAGTCGCTGC AAGAGACCGT GCGCGCGGCC
ATCGCCGACC GCGCGCCGCT GGAGATTGCC GGCGGCGGCA GCAAGGCCTT CCTGAATCCG
CCGACCGATG CGACGCTGCG CCGGCTCGAC GTGCGCCCAC TCGCCGGCAT CAGTGCCTAC
GAGCCCAGCG AGCTGGTCGT CACGGTGCGC GCCGGCACGC CGCTGGTCGA GCTGGAAGCG
GCACTGGCCG AGTGCGGGCA GTGCCTGCCG TTCGAACCGC CGCGGTTCGC CGTGAATGGC
CCGTCGGCCG GCACCGTGGG CGGCATGGTC GCCAGCGGCC TGGCCGGCCC GGCACGCGCC
AGCGTGGGCA GCGTGCGCGA CTACGTGCTC GGCGCCACCC TGCTCGACGG CCGTGCCGAT
CTGCTGAGCT TCGGCGGGCA GGTGATGAAG AACGTCGCCG GCTACGACGT CTCGCGGCTG
CTGGCGGGCT CTTTCGGGGC GCTGGGCGTG ATCTGCGAGG TCTCGCTCAA GGTGCTGCCG
CGGCCGGTGG CGAGCACCAC GCTGCGTTTC GAGATGGACG AGGCGCAGGC GCTCGCCAGC
CTCAAGGCCT GGTGTCGCAA GCCGCTGCCG ATCAGCGCCA GCGCCTGGAG CCGCGGCGTG
CTGTGGCTGC GCCTGAGCGG CGCGCAGGCG GCGGTGGCGT CGGCGCAGCG CACGCTGGGT
GGCGAGCCGA TCGCGGACGA CCTGGCGCAG CGTGGCTGGC TCGACGTGCG CGACCAGAAC
CACCCGTTGC TGGTCGACGT GCTGCCGCGC GGGCGGCGGC TGTGGCGCCT GTCGGTGCCG
CCGCACACCG GCCGGCTGGC GCTGCCCGGC GCGGTCGGCG ACAGCCTGGT CGAGTGGCAC
GGCGGCCAGC GCTGGGCCCT GAGCGATGCG CCGCCCGCGC TGGTGCACGC GCTGGCGGCC
GAGGTCGGCG GCCATGCGCG CATCTGGCGC GGCGCCTTGG CCGGCGACGC CGTGCAGCCG
GCGCTGTCCG AGTTGTCGGC GCCGCTGCAC GCGGTGCACC AGCGCATCAA GGACGCCTTC
GATCCCCTCC ATCTTTTCAA CCCCGGCCGG CTGGCTGCGG GGCTCTGA
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| Protein sequence | MNTIRQDAAL QSLQETVRAA IADRAPLEIA GGGSKAFLNP PTDATLRRLD VRPLAGISAY
EPSELVVTVR AGTPLVELEA ALAECGQCLP FEPPRFAVNG PSAGTVGGMV ASGLAGPARA
SVGSVRDYVL GATLLDGRAD LLSFGGQVMK NVAGYDVSRL LAGSFGALGV ICEVSLKVLP
RPVASTTLRF EMDEAQALAS LKAWCRKPLP ISASAWSRGV LWLRLSGAQA AVASAQRTLG
GEPIADDLAQ RGWLDVRDQN HPLLVDVLPR GRRLWRLSVP PHTGRLALPG AVGDSLVEWH
GGQRWALSDA PPALVHALAA EVGGHARIWR GALAGDAVQP ALSELSAPLH AVHQRIKDAF
DPLHLFNPGR LAAGL
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