| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1166 |
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| Symbol | |
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| ID | 6162673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1248933 |
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| End bp | 1249817 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663920 |
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| Product | Ion transport protein |
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| Protein accession | YP_001790200 |
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| Protein GI | 171057851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA CGACCCCTCC CGCGCTCGAC TCGGCCAGCC ACATCGACGC CGATCGTTTC
GGCCGCCCCG ACGGCGGCTG GCGGCTGCGG CTCTACACCG TGATCTTCGA GTCCGACACC
CGCGCCGGCC GGCTGTTCGA CGTGGTGCTG ATCTGGGCCA TCCTGGCCAG CGTCGGGGTG
GTCATGCTCG ACAGCGTGGC CGCGCTCAAC CAGCGCTGGG CGGCGTGGTT CACGGTGGCC
GAATGGCTGT TCACGCTGCT GTTCATGGCC GAATACGCGG CCCGCCTGCT GTGCGTGAAA
CGCCCGCGCG CCTACGCGCT GAGCTTCTAC GGCGTGGTCG ACCTGCTGGC GATCCTGCCC
ACGCTGCTGG CGGTGCTGGT GCCCGATCTG CACCTGCTGA TCGACGTGCG CATCCTGCGG
CTGCTGCGCG TGATCCGCAT CTTCAAGCTC TCGCACTACG CCGCCGAGGT GCGCTACCTG
AGCACCGCGC TGCTGGCCAG CGGCCGCAAG ATCGCGGTGT TCCTGGGTTT CGTGATCCTG
GTGGTGATCG TGATGGGTAC GCTGATGTAC GTGGTCGAGG GCCCGGGCAA CGGCTACACC
AGCATCCCGG CGTCGATCTA CTGGGCCATC ACGACGATGA CCACGGTGGG CTTCGGCGAC
ATCACGCCCA AGACCGATCT GGGCCGTTTC ATCGCTTCGC TGATGATGCT GGTGGGCTGG
GGCGTGCTGG CGGTGCCGAC CGGCATCGTC ACGGCCGAGA TGAGCGCGCA GCGGCGCGGC
GGTGCAGCGC CGCCGCTTGC GCCCAGGGCC TGCCCGGCCT GCCACGCCGT CGATCACCAG
AGCGATTCGG CGCATTGCCG CCATTGCGGC GCGCTGCTGC CCTGA
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| Protein sequence | MTATTPPALD SASHIDADRF GRPDGGWRLR LYTVIFESDT RAGRLFDVVL IWAILASVGV
VMLDSVAALN QRWAAWFTVA EWLFTLLFMA EYAARLLCVK RPRAYALSFY GVVDLLAILP
TLLAVLVPDL HLLIDVRILR LLRVIRIFKL SHYAAEVRYL STALLASGRK IAVFLGFVIL
VVIVMGTLMY VVEGPGNGYT SIPASIYWAI TTMTTVGFGD ITPKTDLGRF IASLMMLVGW
GVLAVPTGIV TAEMSAQRRG GAAPPLAPRA CPACHAVDHQ SDSAHCRHCG ALLP
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