| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1148 |
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| Symbol | |
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| ID | 6164027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1229311 |
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| End bp | 1230162 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663902 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001790182 |
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| Protein GI | 171057833 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT GGACCACGCG TCGTTTCCTG AAGACCGCCG GCTTCGTTGC CGCCGCCCTC
GTGCTCGTCG CCTGCGGCAA GAAGGAAGAA GCCGCCGCGC CGGCTGCCTC GGCCGCAGCC
GCGCCCCCGC CGCCGCCCGC CAAGGTCTAC GTGGTGGGCA CCGACGCCGC CTACGCACCG
TTCGAGCTGC AGAACGAGAA GGGCGAGATC GTCGGCTTCG ACATCGACGT GGTCACGGCC
ATCGCGGCCA AGGCCGGCAT CGAGGTCAAG TTCGTCAACA CGCCGTGGGA AGGCATCTTC
AACGCGCTCG GCCAGGGTGA CCGCGACGCG CTGGTGTCGT CGATCACGAT CACCGAGGAG
CGCAAGCAGA CGATGGATTT CAGCGCGCCG TACTTCGATG CGCAGCAGCT GATCGCCGTC
AAGGACACCT CCAAGGTGGC CAAGTTCGCC GACCTGAAGA AGCTCAAGGT GGGCGTGCAG
ACCGGCACCA CCGGCGACGA GGTGGTGACC AAGCTGCTGG GCAAGAACAG CACCAACATC
AAGCGGTTCG AGTCGACCCC GCTGGCCCTG AAAGAGCTGC AATCGGGCGG CGTCGACGCG
GTGGTGGCCG ACAACGGCGT GGTGATCCAC TACGTGGCCA ACAACCCGGC CGACAAGTTC
AAGACGGTGG CCGACAACAC CAGCTTCGCG CCCGAGCAGT ACGGCATCGC CGTCAAGAAG
GGCAACGCCG AGCTGCTGGA GAAGATCAAC AAGGGCCTGG CCGACATCAA GGCCGACGGC
ACCTACGACA AGATCTACGC GCAGTATTTC GGTGCGGCGC CGGCAGCGGC CGAGGCCGCG
GCTTCGAAGT AA
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| Protein sequence | MTRWTTRRFL KTAGFVAAAL VLVACGKKEE AAAPAASAAA APPPPPAKVY VVGTDAAYAP
FELQNEKGEI VGFDIDVVTA IAAKAGIEVK FVNTPWEGIF NALGQGDRDA LVSSITITEE
RKQTMDFSAP YFDAQQLIAV KDTSKVAKFA DLKKLKVGVQ TGTTGDEVVT KLLGKNSTNI
KRFESTPLAL KELQSGGVDA VVADNGVVIH YVANNPADKF KTVADNTSFA PEQYGIAVKK
GNAELLEKIN KGLADIKADG TYDKIYAQYF GAAPAAAEAA ASK
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