| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1141 |
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| Symbol | |
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| ID | 6163814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1221544 |
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| End bp | 1223016 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663895 |
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| Product | xanthine permease |
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| Protein accession | YP_001790175 |
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| Protein GI | 171057826 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA CCACGGTCCA CCCGGTGGAC GAGAAGATCC CGACCCCGCG CCTTGCCGCG
CTCGGCTTCC AGCACGTGCT GGTGATGTAC GCCGGCGCCA TCGCGGTGCC GCTGATCGTC
GGCCGCGCGC TCAAGCTCAG CCCCGAGCAG GTGGCGCTGC TGATCTCGGC CGACCTGTTC
TGCTGCGGCA TCGTCACGCT GATCCAGTCG CTGGGCGTGA CGCAGTGGTT CGGCATCCGC
CTGCCGGTGA TGATGGGCGT GACGTTTGCG GCAGTCGGCC CGATGGTGGC GATGGCCGAG
GCGGTGCCGG GCCTGGACGG GGCGCGGGCG ATCTTCGGCG CCATCATCGC CGCGGGCGTG
ATCGGCATCT TCATCGCGCC GCTGGCGAGC CGCATGCTGC GCTTCTTTCC GCCGGTCGTC
ACCGGCACCA TCATCGCGGT GATCGGCGTC AGCCTCATGC GCGTGGGCAT CGGCTGGGCG
ATGGGCGGGC CGGCCTTCAT GGCCAAGATC CCCGACCCGG CCCACCTGCA GGCCGTCGCC
AACGCCAAGG CGGCCGGCAC AGCGCTGCCG TTCGGGCCGA CACCGATGGT CGCCAACCCC
AACTACGCCG CGCTCGACAA CCTGGCCATC GCGCTGTTCG TGCTGGCCGC GATCATGCTG
ATCGCCAAGT ACGGCCGCGG CTTCATCGCC AACATCTCGG TGCTGCTGGG CATCGTGATC
GGCGGCATCG TCGCCGCCGC GCTCGGCAAG ATGACGTTCG GCAAGGTGGC GAGCGCGCAC
TGGTTCGACC TGGTGCTGCC CTTCTCGTTC GGCATGCCCA CCTTCGACCC GGTGCTGATC
GCCACCATGG TGCTGGTGAT GATCGTCACC TTCATCGAAT CGACCGGCAT GTTCCTCGCG
CTGAGTGATC TCACCGGCCG CAAGCTGACG CAACAGAGCC TGACCGCCGG CCTGCGCACC
GACGGCCTGG GCACGCTGAT CGGCGGCATC TTCAACACCT TCCCGTACAC CAGCTTCTCG
CAGAACGTCG GCCTGGTCGG CGTCACCGGC GTGCGCAGCC GCTTCGTCTG CGTGGCCGGC
GGCATCATCC TGATCGTGCT CGGGCTGATC CCGAAGATGG CCGCGCTGGT CGAGTCGCTG
CCGCAGTTCG TGCTGGGCGG CGCCGGGCTG GTGATGTTCG GCATGGTGGC GGCCACCGGC
ATCCGCATCC TGGCGGGGGT CGACTACAAG ACCAACAAGA ACAACCTCTA CATCGTGGCG
GTGTCGATCA GCGCCGGCAT GATCCCGCTG GTGGCGCCGG CCTGGACCCA GCACATGGCG
CACAGCCTGC ACCCGCTGCT GGAATCGGGC ATCCTGCTGA CCACGATCAG CGCGGTGCTG
CTCAACATGT TCTTCAATGG CGCCTCGCTC AATCAGGACA GCAGTGAAGC CCAAGCGCGC
CACGCCGCGA TGCAGGCCGA AGGCGGGCAC TGA
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| Protein sequence | MSDTTVHPVD EKIPTPRLAA LGFQHVLVMY AGAIAVPLIV GRALKLSPEQ VALLISADLF
CCGIVTLIQS LGVTQWFGIR LPVMMGVTFA AVGPMVAMAE AVPGLDGARA IFGAIIAAGV
IGIFIAPLAS RMLRFFPPVV TGTIIAVIGV SLMRVGIGWA MGGPAFMAKI PDPAHLQAVA
NAKAAGTALP FGPTPMVANP NYAALDNLAI ALFVLAAIML IAKYGRGFIA NISVLLGIVI
GGIVAAALGK MTFGKVASAH WFDLVLPFSF GMPTFDPVLI ATMVLVMIVT FIESTGMFLA
LSDLTGRKLT QQSLTAGLRT DGLGTLIGGI FNTFPYTSFS QNVGLVGVTG VRSRFVCVAG
GIILIVLGLI PKMAALVESL PQFVLGGAGL VMFGMVAATG IRILAGVDYK TNKNNLYIVA
VSISAGMIPL VAPAWTQHMA HSLHPLLESG ILLTTISAVL LNMFFNGASL NQDSSEAQAR
HAAMQAEGGH
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