| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1135 |
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| Symbol | |
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| ID | 6163906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1215282 |
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| End bp | 1217072 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663889 |
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| Product | glyoxylate carboligase |
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| Protein accession | YP_001790169 |
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| Protein GI | 171057820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TGAAGGCCGC AATGGCCGCC GTGCTGGTGA TGGAGAAAGA AGGCATCTCC
CAGGCCTTCG GCGTGCCGGG TGCGGCGATC AACCCGCTGT ATGCGGCGAT GCGCGAGCGG
CAGTCGATCG CGCACATCCT GGCCCGCCAC GTCGAAGGCG CCTCGCACAT GGCCGAGGGC
TACACCCGCG CCAGGGCCGG CAACATCGGC GTGTGCATCG GCACCTCCGG GCCGGCCGGC
ACCGACATGA TCACCGGCCT GTATTCGGCC ATTGCCGACA GCATCCCGAT CCTGTGCATC
ACCGGCCAGG CGCCGCGCTC ACGGCTCTAC AAGGAAGACT TCCAGGCCGT CGACATCGAG
AGCATCAGCA AACCGGTCAC GAAATGGAGC GTGACGGTGC GCGAGCCGGG GCTGGTGCCG
CGCGCCTTCC AGCAGGCCTT CCACCTGATG CGCTCGGGCC GCCCGGGCCC CGTGCTGATC
GACCTGCCGT TCGACGTGCA GATGGCCGAG ATCGAGTTCG ACATCGACAC CTACGAGCCG
CTGCCGGTCT ACAAGCCCGC CGCCACGCGC CGCCAGATCG AGCGTGCGCT CGACATGCTG
GCCGCCGCGC ACAAGCCGCT GATCGTGGCC GGCGGCGGCA TCATCAACGC CGACGCGGCC
GCGCTGCTGG TCGAGTTTGC CGAGCTGACG GGCGTGCCGG TGATTCCGAC GCTGATGGGC
TGGGGCGCGA TCCCCGACGA CCACCCGCTG ATGGCCGGGA TGTGCGGCCT GCAGACCAGC
CACCGCTACG GCAACGCGAC GATGCTGGCG AGCGACTTCG TGCTCGGCAT CGGCAACCGC
TGGGCGAACC GCCACACCGG CAGCACCGAG GTCTATTGCA AGGGCCGCAC CTTCGTGCAC
GTCGACATCG AGCCCACGCA GATCGGCCGC GTCTTCACGC CCGATTTCGG CATCGTCAGC
GATGCGAAAG CGGCACTCGA ACTCTTCGTG CAGGTGGCGC GTGAGCGCAA GGCCGCCAGC
CAGTTGCGCA ACTTCAGCGA CTGGGCCCAG CGCTGCGCCG AGCGCAAGCA GCTGATGCAC
CGCAAGACCC ACTACACGCA GACGCCGATC AAGCCGCTGC GCGTGTACGA GGAGATGAAC
AAGGCCTTCC CGCGCGACAC GATCTACGTC ACGACCATCG GCCTGTCACA GATCGCCGGC
GCGCAATTCC TGCATGTCTA CGGGCCGCGC CAGTGGATCA ACTGCGGCCA GGCCGGCCCG
CTGGGCTGGA CCATCCCTGC CGCGCTCGGT GTGGTGGCGG CCGACCCGAC ACGCACGGTG
GTCGGGCTGT CGGGCGACTA CGATTTCCAG TTCCTGATCG AGGAGCTGGC GGTGGGCGCG
CAGTTCCGCC TGCCTTATGT GCAGGTGCTG GTCAACAACA GCTACCTCGG CCTGATCCGC
CAGAGCCAAC GCGGTTTCGA GATGGACTAC TGCGTGCAGC TGGCGTTCGA GAATCAGAAC
GTCGACGACC CCGCGCTGCA GAGCTACGGC GTCGATCACC AGGCCGTCGT GCAGGGCCTG
GGCTGCAAGT CGCTGCGCGT GACCGACCCC GAGAAGATCG AGGCCGCGCT GATCGAGGCC
CAGGCCATGG CGCAGCAATA CCGCGTGCCG GTGGTGGTGG AGGTGATCCT CGAGAAGGTC
ACCAACATCG CGATGGGCAC CGAGATCGAC AAGGTCAACG AGTTCGAAGA GATCGACTGC
CGCCACCCCG AAGGCCGACA AGGCCTGGAG ATGGCCGGCC TTCTGGAATG A
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| Protein sequence | MAKMKAAMAA VLVMEKEGIS QAFGVPGAAI NPLYAAMRER QSIAHILARH VEGASHMAEG
YTRARAGNIG VCIGTSGPAG TDMITGLYSA IADSIPILCI TGQAPRSRLY KEDFQAVDIE
SISKPVTKWS VTVREPGLVP RAFQQAFHLM RSGRPGPVLI DLPFDVQMAE IEFDIDTYEP
LPVYKPAATR RQIERALDML AAAHKPLIVA GGGIINADAA ALLVEFAELT GVPVIPTLMG
WGAIPDDHPL MAGMCGLQTS HRYGNATMLA SDFVLGIGNR WANRHTGSTE VYCKGRTFVH
VDIEPTQIGR VFTPDFGIVS DAKAALELFV QVARERKAAS QLRNFSDWAQ RCAERKQLMH
RKTHYTQTPI KPLRVYEEMN KAFPRDTIYV TTIGLSQIAG AQFLHVYGPR QWINCGQAGP
LGWTIPAALG VVAADPTRTV VGLSGDYDFQ FLIEELAVGA QFRLPYVQVL VNNSYLGLIR
QSQRGFEMDY CVQLAFENQN VDDPALQSYG VDHQAVVQGL GCKSLRVTDP EKIEAALIEA
QAMAQQYRVP VVVEVILEKV TNIAMGTEID KVNEFEEIDC RHPEGRQGLE MAGLLE
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