| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1121 |
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| Symbol | |
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| ID | 6162143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1197549 |
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| End bp | 1198493 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663875 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001790155 |
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| Protein GI | 171057806 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.465327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCACCC GCCTGATCAA CGTCGGCCGC CTGCCGCCCG CCCTCGAAGC CCGCCTCGCG
CAGAGCTACG ACCTGAGCAC GCTGGCCGAC CAGGCCGACC CCGCCGCCTA CCTGGCCGCG
CACGGCGGCG AGTTCGAGGC GCTGGTGACG TCGGCCGCCA CCGGCGTCGA CGCCGCCATG
CTCGCCGCCT TGCCGCGGCT GCGGGTGATC TCCAACTTCG GCGTCGGGCT GGACAAGGTC
GACGTGGCCG CCGCCCACGC CCGCGGCATC GCCGTGGGCT ACACGCCCGA CGTGCTCAAC
GACTGCGTGG CCGACATCGC CTTCGGGCTG ATGCTCGACG CCGCACGCGG CATGAGCGCG
GCCGACCGTT TCGTGCGGCG CGGCGACTGG CTCCAGGGCC CGTTTCCGCT GGCGCGCAAG
GTCAGCGGCG CGAGGCTGGG GCTGGTCGGC CTGGGCCGCA TCGGCCGCAC CATCGCGCAG
CGTTCGACCG GTTTCGAGAT GCCGGTGCGC TACCACTCGC GCCGGCCGGT CGACGGCGTG
GCCTGGGTGC ACGAGCCGTC GCTGCTGGAG CTGGCGCGCT GGGCCGACTT CCTGGTGGTC
ATCACCGCCG GCGGGCCGGC CACGCGCCAC CTGGTCAACG CCGAGGTGCT CGACGCGCTG
GGGCCGGACG GTTTCCTGAT CAACGTGGCG CGCGGCTCGG TGATCGACGA GCCGGCGCTG
GTGCAGGCGC TGGCCGACCG GCGCATCGCC GGCGCCGGGC TCGACGTGTT CGAGGACGAA
CCGCGTGTGC CGGCTGCCCT GATGGCGCTC GACAACGTCG TGCTGCTGCC CCACATTGCG
AGTGCAACCC GCGAGACCCG CCAGGCCATG GCCGACCGGG TGTTCGACAA CCTGCAGAGT
TTCTTCGCCG AGGGACGCCT GGTCTCCGCG GCGCCCTCGG CCTGA
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| Protein sequence | MRTRLINVGR LPPALEARLA QSYDLSTLAD QADPAAYLAA HGGEFEALVT SAATGVDAAM
LAALPRLRVI SNFGVGLDKV DVAAAHARGI AVGYTPDVLN DCVADIAFGL MLDAARGMSA
ADRFVRRGDW LQGPFPLARK VSGARLGLVG LGRIGRTIAQ RSTGFEMPVR YHSRRPVDGV
AWVHEPSLLE LARWADFLVV ITAGGPATRH LVNAEVLDAL GPDGFLINVA RGSVIDEPAL
VQALADRRIA GAGLDVFEDE PRVPAALMAL DNVVLLPHIA SATRETRQAM ADRVFDNLQS
FFAEGRLVSA APSA
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