| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1103 |
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| Symbol | |
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| ID | 6160596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1175845 |
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| End bp | 1177047 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663857 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790137 |
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| Protein GI | 171057788 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3748] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.156195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCT ACCTGCTCGA CTGGGCCAAC CTGCTGCTGC GCTGGCTGCA CGTCATCACC
GCGATCGCCT GGATCGGCTC GTCGTTCTAC TTCGTCTGGC TCGACAACAG CCTGGTGCCA
CCGGCCGATC CGGCCGCGCG TGACCGAGGC GTGGGCGGCG AGATCTGGTC GGTGCACGGC
GGCGGGTTCT ACAACGCCCA GAAATACCCG CTCGGCCCCA GCAAGATGCC CGCGCACCTG
CACTGGTTCT ACTGGGAGAG CTACAGCACC TGGCTGTCGG GTTTCGGCCT CTTCACGGTG
CTCTATCTCT GGAACGCCGG CACCTTCCTG GTCGACAAGA GCCGCATGGA CTGGTCGCCG
CTGGCCGCCG GCAGCGCGGC CCTGGGCTTT CTGGTGGCGG GCTGGCTGGT CTACGACCTG
ATCTGTCGCG TCATCGGCCA GAAGAAGGCC GCCGACGGCA CGCTGTCGAC CGGCAACGAC
GGCCTGGTGC TGGGCCTGCT GTTCGTCTAC ACCGTGGCCG CCACCTGGCT GGCCTGCCAG
CTGTTCGCCG GCCGCGCGGC CTTCCTGCTG ATGGGCGCGA TGCTCGCCAC CATCATGAGC
GCCAACGTGC TGTTCTGGAT CATCCCCGGC CAGCGCACCG TGGTGGCCGA CCTGACGGCC
GGGCGGCCGA TGCAGGCGAT CTTCGGCCAG CGCGGCAAGC AGCGCAGCGT GCACAACACC
TACTTCACGC TGCCGGTGCT GATCGCGATG CTGTCCAACC ACTACGGCAT GCTGTTCCAG
CATCCGCAGA ACTGGCTGGT GCTCAGCGCG CTGATGCTGG TGGGCGCGCT GGTGCGGCAG
TTCTTCGTGG CGCGCCACAA GGGCCGGCAG CTGTGGCCGC TGGTGGCCGC GGCGCTGCTG
ATCCTGGCCG TGCTGATCGC CTGGCTGGCG CCGGCGAAGG TCGTCGAGGA CGCGGCGGCC
GCACCGGTGA CGCTGGCGCA GGTGCAGCCC ATCATCGAGC AGCGCTGCGT GCTGTGCCAC
AACGCCCAGC TGCCCAACAA GGGCGTGGCG CTGCACAGCG CCGAGCTGAT CGAGCAGCAC
CGCCAGCAGA TCTACCAGCA GGTCGTGCTG CAGAAGCTGA TGCCGCTGAA CAATGCCACC
GGCATCACCG AGGCAGAGCG CACGCTGATC GGCCGCTGGG CCCAGGCCGA CCACAAGCCC
TGA
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| Protein sequence | METYLLDWAN LLLRWLHVIT AIAWIGSSFY FVWLDNSLVP PADPAARDRG VGGEIWSVHG
GGFYNAQKYP LGPSKMPAHL HWFYWESYST WLSGFGLFTV LYLWNAGTFL VDKSRMDWSP
LAAGSAALGF LVAGWLVYDL ICRVIGQKKA ADGTLSTGND GLVLGLLFVY TVAATWLACQ
LFAGRAAFLL MGAMLATIMS ANVLFWIIPG QRTVVADLTA GRPMQAIFGQ RGKQRSVHNT
YFTLPVLIAM LSNHYGMLFQ HPQNWLVLSA LMLVGALVRQ FFVARHKGRQ LWPLVAAALL
ILAVLIAWLA PAKVVEDAAA APVTLAQVQP IIEQRCVLCH NAQLPNKGVA LHSAELIEQH
RQQIYQQVVL QKLMPLNNAT GITEAERTLI GRWAQADHKP
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