| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1098 |
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| Symbol | |
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| ID | 6160934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1170432 |
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| End bp | 1171667 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663852 |
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| Product | peptidase dimerisation domain-containing protein |
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| Protein accession | YP_001790132 |
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| Protein GI | 171057783 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.975986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCAG CCACCGTCTT CGATCAGCTC GACAGCTGGA TCGATGCCCA CTTCGACGAG
CAGGTGCGCT GCCTGCAAGC CCTGGTGCAG GTGCCCACCG ACACCCCGCC CGGCAACAAC
GCGCCGCATG CCGAGCGCAC GGCGCAGATC CTCGAAGGCT ATGGCTACAC GGTCGAGAAA
CACGCGGTGC CCGAGGCGAT CGTGCGCGAC TACGGCCTGC AGTCGATCAC CAACCTGATC
GTGCGTCGGC GTTTCGGTGA CGGCGGGCGC ACCATCGCGC TCAATGCCCA CGGCGACGTC
GTGCCACCGG GCGACGGGTG GACACACGAT CCCTATGGCG GCGAGGTGGT CGACGGCAAG
CTCTATGGCC GCGCCAGTGC GGTCAGCAAG AGCGACTTCT CGACCTTCAT CTTTGCACTG
CGTGCGCTCG AATCGCTGGG CGCGCCGCTG AAAGGCGCGG TCGAGCTGCA TTTCACCTAC
GACGAGGAAT TCGGCGGAGA GCTCGGCCCG GGCTGGCTGC TCCAGCACAA GCTCACGAAA
CCCGACCTGC TGATTGCCGC CGGCTTCAGC TACGAGGTGG TCACCGCCCA CAACGGCTGT
CTGCAGATGG AGGTGACGGT GCACGGCAAG ATGGCTCACG CGGCCATTCC GCACACCGGC
ATCGACGCAT TGCAGGGCGC GGTGGCGATC CTGAATGCGC TCTATCACCA GAACACGCTC
TACCAGGCGG TGACGTCGAA GGTACCCGGC ATCAATCACC CGTATCTGAA CGTGGGACGC
ATCGAGGGCG GCACCAACAC CAATGTCGTG CCGGGCAAGG TGATGTTCAA GCTCGATCGC
CGCATGATCC CCGAAGAGAA CGCGGCAGAA GTCGAGGCAG CCATCCGCGG CGTGATCGCC
GACGCGGCGG CCACGTTGCC GGGTATCACG GTCGACATCA AGCGCCTTCT TCTGGCTCAT
TCACTGAGCC CCCTGCCCGG CAACGCGCCG CTGGTGACGG CATTGCAGAA GCATGGCGAG
GTCGTGTTCG GCGAGCCTTT GCCGACGTCG GGAACGCCCC TCTACACCGA CGTCCGGCTG
TATTGCGCCG AGGGCATTCC GGCGGTCATT TATGGTGCGG GGCCACGCAC TGTTCTGGAG
AGCAATGCCA AGCGTGCCGA CGAGCATCTG GTGCTCGAAG ACCTGCGCCG CGCCACCAAG
GTGGTGGCCC GCTCGCTCTG CGAACTGATG TCCTGA
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| Protein sequence | MSPATVFDQL DSWIDAHFDE QVRCLQALVQ VPTDTPPGNN APHAERTAQI LEGYGYTVEK
HAVPEAIVRD YGLQSITNLI VRRRFGDGGR TIALNAHGDV VPPGDGWTHD PYGGEVVDGK
LYGRASAVSK SDFSTFIFAL RALESLGAPL KGAVELHFTY DEEFGGELGP GWLLQHKLTK
PDLLIAAGFS YEVVTAHNGC LQMEVTVHGK MAHAAIPHTG IDALQGAVAI LNALYHQNTL
YQAVTSKVPG INHPYLNVGR IEGGTNTNVV PGKVMFKLDR RMIPEENAAE VEAAIRGVIA
DAAATLPGIT VDIKRLLLAH SLSPLPGNAP LVTALQKHGE VVFGEPLPTS GTPLYTDVRL
YCAEGIPAVI YGAGPRTVLE SNAKRADEHL VLEDLRRATK VVARSLCELM S
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