| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1096 |
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| Symbol | |
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| ID | 6160932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1168316 |
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| End bp | 1169134 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663850 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790130 |
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| Protein GI | 171057781 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.689676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAT TCGTTGATTT CAACGGTGTC TGGCTGGCCT ACAACGACGA GTTGATGGCG
CAGGGCCAGT ACGCCGTCGA GGACATCAAC CTGAAGGTCG ACGAGGGTGA ATTCATCGCC
ATCGTCGGGC CGTCGGGCTG CGGCAAGTCG ACCTTCATGA AACTGGCCAC CGGTCTCAAG
CGCCCGAGCA AGGGCACGGT GATCATCGGT GGCCATGAAG TGAAGGGGCC GCTGAAGATC
ACCGGCATGG CCTTTCAGGC ATCGAGCCTG CTGCCGTGGC GCACCACGCT CGAGAACGTG
CTGCTGCCGC TGGAGATCGT CGAGCCCTAT CGGTCGAACT TCAAGCAGAA GAAGGCCGAG
TACGAGGACA AGGCGCGCCG GCTGCTGCAG AGCGTGGGGC TCGGTGGTTA CGAGGACAAG
TTCCCGTGGC AGCTGTCCGG CGGCATGCAG CAGCGGGCCT CGATCTGCCG CGCGCTGATC
CACGAGCCCA GGATGCTGCT GCTCGACGAG CCCTTCGGCG CGCTCGATGC CTTCACGCGC
GAGGAACTGT GGTGCACGCT GCGCGACCTG CAGGCGGCGC AGAAGTTCAA CGTCATCCTG
GTCACGCACG ACCTGCGCGA AAGCGTCTTC CTGGCCGACA CGGTGTACGT GATGAGCAAG
AGCCCGGGGC GTTTCGTGGT GCGGCGCGAG ATCGACCTGC CGCGCCCGCG CGACCTCGAG
GTGACCTACA GCCCCGAGTT CACCGCCATC GTGCACGAGT TGCGTGGCCA CATCGGCGCC
ATGCGCAAGC CCGCCAACCG CGTGGAGATC GCGCAATGA
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| Protein sequence | MSAFVDFNGV WLAYNDELMA QGQYAVEDIN LKVDEGEFIA IVGPSGCGKS TFMKLATGLK
RPSKGTVIIG GHEVKGPLKI TGMAFQASSL LPWRTTLENV LLPLEIVEPY RSNFKQKKAE
YEDKARRLLQ SVGLGGYEDK FPWQLSGGMQ QRASICRALI HEPRMLLLDE PFGALDAFTR
EELWCTLRDL QAAQKFNVIL VTHDLRESVF LADTVYVMSK SPGRFVVRRE IDLPRPRDLE
VTYSPEFTAI VHELRGHIGA MRKPANRVEI AQ
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