| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1094 |
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| Symbol | |
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| ID | 6160930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1167015 |
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| End bp | 1167515 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663848 |
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| Product | CMP/dCMP deaminase zinc-binding |
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| Protein accession | YP_001790128 |
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| Protein GI | 171057779 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT TTCGTCATCC GGACCCGACG CCTGCGCAGA TGCTCCTGCA TCTGCGTGGC
GCCAACCAGA TCGCCCGCGC GGCGCTGGCC GCGGGCCACC ACCCCTTCGG CGCACTGCTG
GTTGCGGCAG ACCATCGGAC CGTGCTGCTC AGCCAGGGCA ATCTGGACAG CGTCAATCAC
GCCGAAGCGG TGCTGGCGCG CGAGGCCGCC CGGCGCTTCA GTCCTGCCGA GTTGTGGGAC
TGCACGCTCT ACACCACCGT CGAGCCGTGC TGCATGTGTG CCGGCACGCA GTACTGGGCT
CACATCGGTC GGCTGGTCTT CGGCATGAGC GAGGCCGATC TGCTGAGCCT GACCGGATCT
CACCCCGAGA ACCCGACCCT GAACCTGCCG TGCCGCGATG TGTTCGTGCA TGGCCAGAAG
CCGGTGCGTA TCTGGGGCCC GGTGGCCGAG GTGCACGACG AGATTGCCGA ACTGCACCGG
CATTTCTGGC TCACGCGGTG A
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| Protein sequence | MSTFRHPDPT PAQMLLHLRG ANQIARAALA AGHHPFGALL VAADHRTVLL SQGNLDSVNH
AEAVLAREAA RRFSPAELWD CTLYTTVEPC CMCAGTQYWA HIGRLVFGMS EADLLSLTGS
HPENPTLNLP CRDVFVHGQK PVRIWGPVAE VHDEIAELHR HFWLTR
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