| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1093 |
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| Symbol | |
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| ID | 6161520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1166555 |
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| End bp | 1166773 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641663847 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001790127 |
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| Protein GI | 171057778 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACTC CCACCCAGAC TGGCATCGTG AAGTGGTTTG ACGACGGCAA GGGCTTCGGC
TTCATCACGC CGGAAGACGG CGGCAAGGAC CTGTTCGCTC ACCACAGCGA AATCCGCAAC
GGTGGCGGTT TCCGCAGCCT GCAGGAAAAC CAGCGCGTCG AGTTCGAAAC GAAGCAAGGC
CCCAAGGGTC TGCAAGCAGC GAACATCCGC CCGCTGTGA
|
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| Protein sequence | MSTPTQTGIV KWFDDGKGFG FITPEDGGKD LFAHHSEIRN GGGFRSLQEN QRVEFETKQG
PKGLQAANIR PL
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