| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1088 |
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| Symbol | |
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| ID | 6161515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1161046 |
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| End bp | 1161738 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663842 |
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| Product | urea ABC transporter, ATP-binding protein UrtE |
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| Protein accession | YP_001790122 |
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| Protein GI | 171057773 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAAG TCTCAGGCCT GAACCAGTAT TACGGCGGAT CGCACATCCT GCGCGGGCTG
GAATTCGAAG CCAAGCTCGG TGAAGTCACC GTCGTGCTCG GCCGCAACGG CGTCGGCAAG
ACGACGCTGC TCAAGAGCCT GATGGGCGTG GTGCCGATCA AGGCCGGCAG CGTCCAGCTC
GACGGTCAGG ACATCTCGAA GGACACGCCC TACGAGCGCG TGCGCAAGGG CGTCGGCTAC
GTGCCGCAAG GGCGCGAGAT CTTCGGCCGC CTGACGGTGG AAGACAACCT GCGCATGGGC
CTGGCCTACA AGAGCGGCAG CACGCCGATC CCGGCCGAGC TGTTCGAGCT GTTCCCGGTG
TTGAAGCAGA TGATCAACCG GCGTGGCGGC GACCTGTCGG GCGGTCAGCA GCAGCAGCTG
GCGATCGCGC GTGCGCTGGC CGCGGGGCCG AAGCTGCTGA TCCTCGACGA GCCGACCGAG
GGCATCCAGC CCAGCATCAT CAAGGACATC GGCCGCGTGA TCCGCATGCT GGCCGATCGC
AAGACGATGG CGATCGTGCT GGTCGAGCAG TTCTACGACT TTGCTGCCGA GCTGGCCGAT
CAGTACCTGG TGATGGAACG CGGCGAGATC ATCGCGCGCG GCCGCGGTCA TCAGATGGAA
GCCGATGGCG TACGCCAGCT GATGTCGATC TGA
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| Protein sequence | MLKVSGLNQY YGGSHILRGL EFEAKLGEVT VVLGRNGVGK TTLLKSLMGV VPIKAGSVQL
DGQDISKDTP YERVRKGVGY VPQGREIFGR LTVEDNLRMG LAYKSGSTPI PAELFELFPV
LKQMINRRGG DLSGGQQQQL AIARALAAGP KLLILDEPTE GIQPSIIKDI GRVIRMLADR
KTMAIVLVEQ FYDFAAELAD QYLVMERGEI IARGRGHQME ADGVRQLMSI
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