| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1076 |
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| Symbol | ureC |
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| ID | 6162274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1145498 |
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| End bp | 1147225 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663830 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001790110 |
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| Protein GI | 171057761 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA TCCCCCGCCG CGCCTATGCC GAGATGTTCG GCCCCACGAT CGGCGACCGT
CTGCGGCTGG CCGATACCGA GCTGATCCTC GAGGTCGAGG ACGATCTGAC GCTGCGCGCC
GGCGGCTACG GCGAAGAAGT CAAGTTCGGC GGCGGCAAGA CCATCCGCGA CGGCATGGGC
CAGGGCCAGC GCGTCAACGG ACCGGGCGCC GCCGACGCGG TCGACTGCGT CATCACCAAC
GCGCTGATCG TCGACCACTG GGGCATCGTC AAGGCCGACA TCGGCCTGCG TGGCAACCGC
ATCGCCGCCA TCGGCAAGGC CGGCAACCCG GACATCCAGC CCGGCGTGGA CATCGTCATC
GGCCCGGGCA CCGAGGTGAT CGCAGCCGAG GGGCTGATCG TCACGGCCGG CGGCATCGAC
AGCCACATCC ACTGGATCTG CCCGCAGCAG ATCGACGAGG CGCTGGCCTC GGGCGTGACC
ACCATGCTCG GCGGCGGCAC CGGCCCGGCC ACCGGCACCT TCGCCACCAC CTGCACGCCC
GGCCCCGAGA ACATCGCGCG CATGCTGCAG GCGGCCGACG CCTTCCCGAT GAACCTGGGC
TTCTTCGGCA AGGGCAACGC CAGCCGGCCC GAGGCGCTGC GCCAGCAGGT CGACGCCGGC
GCGATCGCGC TCAAGCTGCA CGAGGACTGG GGCACCACGC CGGCGGCGAT CGACTGCTGC
CTGAGCGTGG CCGAGCAGAC CGACATCCAG GTCGCGATCC ACACCGACAC GCTCAACGAA
TCGGGCTTCG TCGAGGACAC CGTGGCCGCG TTCAAGGGCC GCACCATCCA CACCTTCCAC
ACCGAAGGCG CCGGTGGCGG CCACGCGCCC GACATCATGA AGGTGGTCGG CGAGGCCAAC
GTGCTGCCGT CGTCGACCAA CCCGACGCGA CCGTACACGG TCAACACGCT CGACGAACAC
CTCGACATGC TGATGGTGTG CCACCACCTC GACGCCGGCA TCGCCGAGGA CCTGGCCTTT
GCCGAAAGCC GCATCCGCCG CGAGACGATT GCCGCCGAGG ACATCCTGCA CGACCTGGGC
GCCATCAGCA TGATGAGCAG CGACAGCCAG GCGATGGGCC GGGTCGGCGA GGTGGTGATC
CGCACCTGGC AGACGGCGCA CAAGATGAAG GTGCAGCGCG GCAAGCTGCC GGGTGACACC
GACCGCCACG ACAACGCACG CATCAAGCGC TACATCGCCA AGTACACGAT CAACCCGGCG
CTGGCTCACG GCATGAGCCA CGAGGTCGGC TCGATCGAGG TCGGCAAGTG GGCCGACCTG
GTGTTCTGGA AACCGGCGTT CTTCGGCGTC AAGCCCAGCC TGGTGCTCAA GGGCGGCTTC
ATCGCGCTGG CCGCGATGGG CGACCCCAAC GCCAGCATCC CGACGCCGCA GCCGGTGCAC
TACCGGCCGA TGTTCGGCAG TTTCGGCGGC GCGCTGGCGC GCACCTCGCT GACCTTCCTG
TCACAGGCCG CACTGGCCGA CGACGTGGGC ACGCGCTACG GCCTGCACAA GCGGCTCGCC
GCGGTGCGTG GCATCCGCAG CGTCAAGAAG GCCGACATGA TCCACAACGG CGCCACGCCG
GTGATGGAGA TCGACGCGCA GACCTACAGC GTGCGCGCCG ACGGCCAGCT GCTGACCTGC
GAACCGGCCC AGGTGCTGCC GATGGCGCAG CGTTATTTCC TGTTCTGA
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| Protein sequence | MATIPRRAYA EMFGPTIGDR LRLADTELIL EVEDDLTLRA GGYGEEVKFG GGKTIRDGMG
QGQRVNGPGA ADAVDCVITN ALIVDHWGIV KADIGLRGNR IAAIGKAGNP DIQPGVDIVI
GPGTEVIAAE GLIVTAGGID SHIHWICPQQ IDEALASGVT TMLGGGTGPA TGTFATTCTP
GPENIARMLQ AADAFPMNLG FFGKGNASRP EALRQQVDAG AIALKLHEDW GTTPAAIDCC
LSVAEQTDIQ VAIHTDTLNE SGFVEDTVAA FKGRTIHTFH TEGAGGGHAP DIMKVVGEAN
VLPSSTNPTR PYTVNTLDEH LDMLMVCHHL DAGIAEDLAF AESRIRRETI AAEDILHDLG
AISMMSSDSQ AMGRVGEVVI RTWQTAHKMK VQRGKLPGDT DRHDNARIKR YIAKYTINPA
LAHGMSHEVG SIEVGKWADL VFWKPAFFGV KPSLVLKGGF IALAAMGDPN ASIPTPQPVH
YRPMFGSFGG ALARTSLTFL SQAALADDVG TRYGLHKRLA AVRGIRSVKK ADMIHNGATP
VMEIDAQTYS VRADGQLLTC EPAQVLPMAQ RYFLF
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