Gene Lcho_1074 details

Gene Information

• Locus tag: Lcho_1074
• ID: 6162344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 1144259
• End bp: 1144873
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641663828
• Product: LemA family protein
• Protein accession: YP_001790108
• Protein GI: 171057759
• COG category: [S] Function unknown
• COG ID: [COG1704] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGCAAC GCCTGATCCG CAGCCTGTTC GCGCTGCTGC TTGCCACCAG CCTGACCGGC 
TGCGGCTACA ACGAATTCCA GCGCCTGGAC GAGCAGGTCA AGGCCGGCTG GGCCGAGGTG 
CTCAACCAGT ACCAGCGGCG CGCCGACCTG GTGCCCAACC TGGTCGCCAC CGTCAAGGGC 
GAGGCCAACT TCGAGCAGGA GACGCTCACC CGGGTGATCG AGGCGCGCTC CAGGGCCACC 
AGCATCCAGG CCACCCCGGA GCTGATCAAC GACCCGGCGG CGTTCCAGAA ATTCCAGGCC 
GCGCAGGGTG AGCTGTCGGG CGCGCTGAGC CGGCTGCTGG TCGTGACCGA GAACTACCCC 
AACCTGAAGG CCAACCAGGG TTTCCAGGAC CTGCGGGTGC AGCTCGAAGG CACCGAGAAC 
CGCATCACCG TGGCGCGCAA CCGATACATC AAGACGGTGA CCGACTACAA CGTGCTGGCG 
CGCAGCTTCC CGACCAACCT GACGGCGATG ATGTTCAGCT ACGACGTCAA GCCCGGTTTC 
ACGGTGCAGA ACGAGGCGCA GATCTCGGCC CCGCCGACGA TCAGCTTCGA CAAGCCCGCC 
CCCCCCGCCA AGTGA 

 

Protein sequence

MSQRLIRSLF ALLLATSLTG CGYNEFQRLD EQVKAGWAEV LNQYQRRADL VPNLVATVKG 
EANFEQETLT RVIEARSRAT SIQATPELIN DPAAFQKFQA AQGELSGALS RLLVVTENYP 
NLKANQGFQD LRVQLEGTEN RITVARNRYI KTVTDYNVLA RSFPTNLTAM MFSYDVKPGF 
TVQNEAQISA PPTISFDKPA PPAK