Gene Lcho_1071 details

Gene Information

• Locus tag: Lcho_1071
• Symbol: ureE
• ID: 6162341
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 1141958
• End bp: 1142662
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641663825
• Product: urease accessory protein UreE
• Protein accession: YP_001790105
• Protein GI: 171057756
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2371] Urease accessory protein UreE

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGACCG TCAACAAACT GATCCCGCAA GGCCGCGGCC TGGCCGCGGT GCTGCTCAAG 
CGTGCCGCCA GCGTCGAGCT CGACTGGGAC ACCCGCCAGA AAAGCCGTTT CGACGCCACC 
GACAGCCAGG CCCGCCACGT CGGCGTGTTC CTGCCGCGCG GCACCGCCGT GCGCGGTGGC 
GACGTGCTGG TGGCCGAAGA CGGCAGCCTG ATCCGCGTCG TCGCCGCGCC GCAGGCCGTG 
CTGGTGGTGC GCGCCTGCAC CCAGCACGGC TCGCCGTTCG ACCTGCTGCG CGCCGCCTAT 
CACCTGGGCA ACCGCCACGT GCAGCTCGAA CTGCAGCCCG ATCAGCTGCA GCTCGAACCC 
GACCACGTGC TGGCCGACAT GCTGCGCCAG ATGCACCTGA TCGTGACCGA GGCACAGGCC 
CCGTTCGAGC CCGAAGCCGG CGCCTACGCC AATGCCGGCC ACGCGCACGG CCATGAGCAC 
AAGCCTGCGC CGGCGCATGA ACACGGTCAT GACCACGCGC ACGCACACGA CCACGCGCAC 
GATCATCACG ATCACGCCCA TGGTTCGGAC CACACGCACG AGACCGTGGC ACAGGCCGCC 
GCACGCGGCA AGCCGCTGTC GATCCCCGTC AGCGCCGCGC CCGCCAAGCC GCACGTGCAC 
GGCCCCGGTT GCGGCCACCA CGGCCACGAT CACGGCAAGC ACTGA 

 

Protein sequence

MLTVNKLIPQ GRGLAAVLLK RAASVELDWD TRQKSRFDAT DSQARHVGVF LPRGTAVRGG 
DVLVAEDGSL IRVVAAPQAV LVVRACTQHG SPFDLLRAAY HLGNRHVQLE LQPDQLQLEP 
DHVLADMLRQ MHLIVTEAQA PFEPEAGAYA NAGHAHGHEH KPAPAHEHGH DHAHAHDHAH 
DHHDHAHGSD HTHETVAQAA ARGKPLSIPV SAAPAKPHVH GPGCGHHGHD HGKH