| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1065 |
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| Symbol | |
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| ID | 6162563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1135527 |
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| End bp | 1136534 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663819 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001790099 |
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| Protein GI | 171057750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAG TCATCTGGGG CGTACTCAGC ACCGCCAAGA TCGGTCTGAC CAAGGTGCTG
CCCGGCATGC TCAAGAGCGA TCGGATCGAG CTGCGCGCGA TCGCCTCGCG CTCGCTGCCG
GCAGCCCGCG AGGCGGCAGA CAAGCTCGGC ATCCCGGTCG CCTACGGCAG CTACGACGAA
CTGCTGGCCG ACCCCGCGAT CGAGGCGATC TACAACCCGC TGCCCAACCA CCTGCACGTG
CCGATGACGC TGGCTGCCGC ACGCGCCGGC AAGCACGTGC TGTGCGAAAA GCCGATCGCA
CTCGATGCCG ACGAGGCCGC GCAGCTGCGC GAGGTGGCCG GCCAGGTGCA CATCATGGAG
GCCTTCATGG TGCGCTTCCA TCCGCAGTGG CAACGTGCCC GCGAGCTGGT GCGCAGCGGC
GCGATCGGCG AGCTCAAGGC GATCCAGGTG TGGTTCTCGT ACTTCAATGC CGACCCGGCC
AACATCCGCA ACCAGCCCGA CATCGGCGGC GGCGCGCTCT ACGACATCGG CTGCTATCCG
ATCGTCGCCG GGCGCTGGTT CTTCGAGGCC GAGCCGCAGC GCGTGGTCGC GCTGGCCGAC
CGCGATCCGG CCTTCGGCAC CGACCGCCTG TTTGGCGCGA TGCTCGATTT CGGCGCCGGC
CGGCAGCTCA ATTTCAGCGT CTCGATGCAG TGCGTGCCGT ATCAGCGCGT GCAGTTGATG
GGCAGCACGG GCCGCATCGA GATCCAGATC CCGTTCAACG CGCCGCAGGG CGCGGCCACG
CGCCTGCTGA TCGACGACGG CAGCGCGCTC GACGGCGGGG GCCTCCGCAT CGAAACCCTG
CCCGAGAGCG ACCAGTACCA GCTGCAGGGC GAGGCGTTTT CACGCGCGGT GCGCGGCGAG
ATCGCGCTGC CTTACGGCGT GGAGGACGCG GTGCAGAACA TGCGGATCAT CGATGCGCTG
TATGCGAGCG AGCGCAGCGG CGCCTGGGTC GGTGTCGGGC CGGCGTGA
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| Protein sequence | MRKVIWGVLS TAKIGLTKVL PGMLKSDRIE LRAIASRSLP AAREAADKLG IPVAYGSYDE
LLADPAIEAI YNPLPNHLHV PMTLAAARAG KHVLCEKPIA LDADEAAQLR EVAGQVHIME
AFMVRFHPQW QRARELVRSG AIGELKAIQV WFSYFNADPA NIRNQPDIGG GALYDIGCYP
IVAGRWFFEA EPQRVVALAD RDPAFGTDRL FGAMLDFGAG RQLNFSVSMQ CVPYQRVQLM
GSTGRIEIQI PFNAPQGAAT RLLIDDGSAL DGGGLRIETL PESDQYQLQG EAFSRAVRGE
IALPYGVEDA VQNMRIIDAL YASERSGAWV GVGPA
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