| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1060 |
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| Symbol | |
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| ID | 6162785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1129587 |
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| End bp | 1130573 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663814 |
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| Product | homoserine kinase |
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| Protein accession | YP_001790094 |
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| Protein GI | 171057745 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCT TCACTGAAGT GTCCGCGGAC GCTGCCGCCG CGCTGTCCGA GCGCCTGGGC
CTGGGTACCG TGACCGAGCT GCGCGGCATC AGCTCGGGCA TCGAGAACAC CAACTACTTC
CTGACCACCG ATCCGGGCGA CGGTGCGCAC GAGTGGGTGC TGACGCTGTT CGAACGACTG
AGCGCCGAGC AGCTGCCGTT CTACCTGCAG CTGATGAAGC ACCTGGCGCA GCGCGACATC
CCGGTGCCCG ATCCGCAGGC CGACATCAAC GGCGAGATCC TGCACAGCCT GTGCGGCAAG
CCGGCCGCGG TGGTCGACAA GCTGGCCGGT GGCCATCAGC TCGCGCCCTC GGTCTGGCAC
TGCCAGCAGG TCGGCGCGAT GCTGGCGCGC ATGCACCTGG CGGCGCGCGA TTTCGCGCTG
CATCAGCCCA ATCTGCGGGG CCTGGCCTGG TGGACGGAGA CGGTTCCCGT GGTCGCGCCC
TACCTGACAC CCGAACAGCG CGCGCTGATC GAGTCGGAGC TGCATTTCCA GCAGGATCTG
GCGCACAGCC CGGCCTTCGC GGCGCTGCCG CGTGGCCCGA TCCACGCCGA CCTGTTCCGC
GACAACGTGA TGTTCGACGG CCTGCCCGGC CACGAGAAGC TCACCGGCTT CTTCGACTTC
TACTTCGCCG GCGTCGACAC CTGGCTGTTC GACCTGGCGG TGTGCCTGAA CGACTGGTGC
ATCGACCTCG ACAGCGGACG CCTCGACGAG GCCCGCGCCC AGGCCTTCGT CAGCGCCTAC
GACGCCGAGC GCGAACTCGG CCACGACGAG ATCCGCCTGC TGCCGGCGCT GCTGCGCGCC
GGCGCCTTGC GCTTCTGGAC CTCGCGGCTG TGGGACTACC ACCTGCCGCG CGAGGCCAGC
ATGCTCAAGG CGCACGACCC GGGCCATTTC GAGCGCGTGC TGCGCGAACG GGTGAACAAC
CCGTGGCACT GGCTGCGCGC CGAGTGA
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| Protein sequence | MAVFTEVSAD AAAALSERLG LGTVTELRGI SSGIENTNYF LTTDPGDGAH EWVLTLFERL
SAEQLPFYLQ LMKHLAQRDI PVPDPQADIN GEILHSLCGK PAAVVDKLAG GHQLAPSVWH
CQQVGAMLAR MHLAARDFAL HQPNLRGLAW WTETVPVVAP YLTPEQRALI ESELHFQQDL
AHSPAFAALP RGPIHADLFR DNVMFDGLPG HEKLTGFFDF YFAGVDTWLF DLAVCLNDWC
IDLDSGRLDE ARAQAFVSAY DAERELGHDE IRLLPALLRA GALRFWTSRL WDYHLPREAS
MLKAHDPGHF ERVLRERVNN PWHWLRAE
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