Gene Lcho_1059 details

Gene Information

• Locus tag: Lcho_1059
• ID: 6162784
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 1128773
• End bp: 1129579
• Gene Length: 807 bp
• Protein Length: 268 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641663813
• Product: hypothetical protein
• Protein accession: YP_001790093
• Protein GI: 171057744

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 67
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACTCC GCTCGGCTCG TGCCCTCGAC GGCGTCGCCT GGATGCGCAG CGGCCTGCGC 
CTGGTGCAGC GCCAACCGCT CGGCCTGGCC GCGCTGCTGG GCATCATGGT GTTCGGCCTC 
GGCCTGCTGC TGATGCTGCC GTGGATCGGC CCGCTGCTGG TGTCGGTGCT GCTGCCGGCG 
CTGACCGCCG GCTGGGTCCA CACTGTCGAG CGGGTGCAAC TCGACGCCCG GCCGTCGCCG 
GCACTGCTGT TCGAGCCGCT GCGCTCGCCG CAGCGCAAGT CCTTGCTGAT GCTCGGTGGC 
GCCCATGCGC TGGCCGTGAT GCTGGCGCTC GGCCTGGCCG ATCTGATCGA CCCCGGCCTG 
GGCGACCTGT GGGAGAGGCT GCATTCAGCC ACCGACGACC AGGCCACTGC CGACGCCTTG 
CAGGCCTTGC GCGGCGGCAT GGTCCTGCGC GTGGCGCTGC TGACGCCGGT GGCGCTGCTG 
TTCTGGCACG CGCCGGTGCT GGTGCACCGC GAAGGCGCGG GCGTCGCCAA GGCCTTGTTC 
GGCAGTACGC TGGCGAGCCT GCGCAACCTC GGCTCCTTCG TGGTCTACGG TCTGAGCTGG 
CTGCTGGCCG ATCTGCTGCT GTCGGCCGTG CTCGGCGTGC TGCTGGGCGC GCTCGGGCTG 
CCGCAGCTGG CCTTGCTGCT CGCGGTGCCG GTGGCGATGC TGTTCTCGGC CGCGTTCTAC 
GCCTCGCTGC ATGCGAGCGT GCACGGCTGC ATCGATTTCG GTGACGCGCT CGACCAGGAT 
CAGACACCAG GCAACCGAGA CGCCTGA 

 

Protein sequence

MKLRSARALD GVAWMRSGLR LVQRQPLGLA ALLGIMVFGL GLLLMLPWIG PLLVSVLLPA 
LTAGWVHTVE RVQLDARPSP ALLFEPLRSP QRKSLLMLGG AHALAVMLAL GLADLIDPGL 
GDLWERLHSA TDDQATADAL QALRGGMVLR VALLTPVALL FWHAPVLVHR EGAGVAKALF 
GSTLASLRNL GSFVVYGLSW LLADLLLSAV LGVLLGALGL PQLALLLAVP VAMLFSAAFY 
ASLHASVHGC IDFGDALDQD QTPGNRDA