Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1047 |
Symbol | |
ID | 6163460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1115934 |
End bp | 1117169 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641663801 |
Product | cysteine desulfurase IscS |
Protein accession | YP_001790081 |
Protein GI | 171057732 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTTA GCAAAATGGA TATGACACCC CACTTCCCGA TCTATATGGA CTATGGCGCA ACCACCCCGG TGGATCCGCG CGTCGTGGAC CAGATGGTGC CCTGGTTGCG CGAGCACTTC GGCAACCCGG CCTCGCGCAG CCACGCCTGG GGCTGGGAGG CAGAAGAGGC GGTCGAGAAG GCGCGTGCGC AGGTCGCGGC TCTGGTCGGC GCCGACCCGC GCGAGATCGT CTGGACTTCG GGTGCCACCG AGTCGATCAA CCTCGCGCTC AAGGGCGCGG CGCAGTTCTA CAAGAGCCGC GGCAAGCACA TCATCACGTT CAAGACCGAG CACAAGGCCG TGCTCGACTC GGTGCGCGAA CTCGAGCGCC AGGGCTTCGA CGCCAGTTAT CTCGACGTGC AGGAAAACGG CCTGATCGAC CTCGATCGCT TCAAGGACGC GCTGCGCCCC GACACGATCC TGGTCTCGGT GCTGCTCGTC AACAACGAGA TCGGCGTGAT CCAGGACATC ACCGCGATCG GCTCGATCTG CCGCGAACGC GGCATCATCT TCCACGTCGA TGCGGCGCAG GCCACCGGCA AGGTCGACAT CGATCTGGCC CACCTGCCGG TCGACCTGAT GAGCCTGGCC TCGCACAAGA CCTACGGCCC CAAGGGCATC GGCGCGCTCT ACGTGCGCCG CAAGCCGCGC GTGCGGCTGG AGGCTCAGAT GCACGGTGGT GGCCATGAGC GCGGCATGCG CTCGGGCACA CTGCCCACGC ACCAGATCGT CGGCATGGGC GCGGCCTTCC AGATCGCACA AGCCGAGATG GGCGCCGAGC GCGAACGCAT CCGCGGTCTG CAGCAGCGTC TGCTGGCCGG CTTGTCGGAC ATCGAGCAGG TCTTCATCAA CGGCGACCTC GAGCGCCGCG TGCCGCACAA CGTCAACGCG TCGTTCAACT TCGTGGAAGG TGAATCGCTG ATCATGGGCG TCAAGGGCAT CGCGGTCTCG TCCGGATCGG CCTGCACCTC GGCCAGCCTG GAGCCCAGCT ATGTGCTGCG GGCGCTGGGC CGCAGCGACG AGCTGGCGCA TTCCAGCCTG CGCATGACGA TCGGTCGTTT CACGACGGTC GAGGAAATCG ACTACGCGGT GTCGACGCTC AAAGACCGCG TCGCCAAGCT GCGCGAGTTG TCGCCGCTGT GGGACATGTA CAAGGACGGT GTCGACCTCA GCACCATCCA GTGGTCGGCA CATTGA
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Protein sequence | MWFSKMDMTP HFPIYMDYGA TTPVDPRVVD QMVPWLREHF GNPASRSHAW GWEAEEAVEK ARAQVAALVG ADPREIVWTS GATESINLAL KGAAQFYKSR GKHIITFKTE HKAVLDSVRE LERQGFDASY LDVQENGLID LDRFKDALRP DTILVSVLLV NNEIGVIQDI TAIGSICRER GIIFHVDAAQ ATGKVDIDLA HLPVDLMSLA SHKTYGPKGI GALYVRRKPR VRLEAQMHGG GHERGMRSGT LPTHQIVGMG AAFQIAQAEM GAERERIRGL QQRLLAGLSD IEQVFINGDL ERRVPHNVNA SFNFVEGESL IMGVKGIAVS SGSACTSASL EPSYVLRALG RSDELAHSSL RMTIGRFTTV EEIDYAVSTL KDRVAKLREL SPLWDMYKDG VDLSTIQWSA H
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