Gene Lcho_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1045 
Symbol 
ID6163600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1115162 
End bp1115494 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content66% 
IMG OID641663799 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_001790079 
Protein GI171057730 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA TGGCCGTCAC CCTCACCGAA GCCGCTGCCA AGCACGTTTC GCGCTACATC 
GCCCGTCGGG GCAAGGGCGT GGGCGTGCGC CTGGGCGTCA AGACCACCGG CTGCTCCGGG
CTGGCCTACA AGCTCGAATA CGCCGACGAG ATCACGCCCG ATGACCACGT GTTCGAAGGC
CACGGCGTGA AGGTGCTGGT CGACCCGAAG AGCCTGCCCT ACATCGACGG CACCGAGCTC
GACTTCGTGC GCGAAGGCCT CAACGAGGGC TTCAAGTTCC ACAACCCGCG CGAGAAGGAC
CGCTGCGGCT GTGGCGAATC CTTCCGGGTC TGA
 
Protein sequence
MTTMAVTLTE AAAKHVSRYI ARRGKGVGVR LGVKTTGCSG LAYKLEYADE ITPDDHVFEG 
HGVKVLVDPK SLPYIDGTEL DFVREGLNEG FKFHNPREKD RCGCGESFRV