Gene Lcho_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1042 
Symbol 
ID6163597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1112326 
End bp1112664 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content65% 
IMG OID641663796 
Productferredoxin, 2Fe-2S type, ISC system 
Protein accessionYP_001790076 
Protein GI171057727 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCA TCAAAATCCT GCCCCATCAG AGCCTTTGTC CCGAGGGCGC CTCGATCACC 
GCTGCGCCCG GCACCTCGGT CTGCGAGGCC CTGCTCGAAA ACGGCATCAA GATCGAACAC
GCCTGCGAGA TGAGCTGCGC CTGCACCACC TGCCACGTGA TCGTGCGCCA GGGGCTGGCG
TCGCTCGGGG AGATCGACGA AACCGAAGAA GACCTGCTCG ACCGCGCCTG GGGCCTCGAG
CCCAACTCGC GCCTGAGCTG CCAGGCCATC CTGGCGCAGC AGGACCTGCT GATCGAGATC
CCGCGCTACA CCATCAACCA CGCCAGCGAA AACCACTGA
 
Protein sequence
MPIIKILPHQ SLCPEGASIT AAPGTSVCEA LLENGIKIEH ACEMSCACTT CHVIVRQGLA 
SLGEIDETEE DLLDRAWGLE PNSRLSCQAI LAQQDLLIEI PRYTINHASE NH