| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1031 |
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| Symbol | |
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| ID | 6159978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1097569 |
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| End bp | 1097838 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641663781 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001790067 |
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| Protein GI | 171057718 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCGCT CGACCATCAA CATCAGCAAT AAATTGGGTT TGCACGCGCG GGCCTCGGCC
AAGCTCACCA AGCTGGTCGG CAGTTTCCCG TGCGAGGTGT TCCTCTCCCG CAGTGGCCGG
CGTGTCAATG CCAAGAGCAT CATGGGCGTC ATGATGCTGG CCGCCGGAAT CGGCAGCGAG
ATCGAGATCG AGGTCGACGG CGAGCGCGAG CAGGAAGCCA TGACGGCCCT GCGCGCGCTG
ATCGACGACA AGTTCGGCGA AGGCGAATAG
|
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| Protein sequence | MIRSTINISN KLGLHARASA KLTKLVGSFP CEVFLSRSGR RVNAKSIMGV MMLAAGIGSE
IEIEVDGERE QEAMTALRAL IDDKFGEGE
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