Gene Lcho_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1030 
Symbol 
ID6159977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1097145 
End bp1097600 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID641663780 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_001790066 
Protein GI171057717 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC TGCTGATCCT TGCCCACGCA CCGCTCGCGT CCGCGCTGAG GGCTGTCGCG 
GAGCACACGT TTCCCGAACT GGTGGAGCGG GTGTTTGCGC TCGATGTCGT TCCGCACGAG 
CCGCCGGAGC AGGTCGAGGC GCGCGCGCGC GAGTTCCTCG CGGCCGGCGC CGATGCGGAT 
CCGGACGTGC TGGTGCTGAC CGACGTGTTC GGCGCCACGC CGGCCAATGT CGCGCAACGC 
CTGGCCGACG GCAGCCGGAT CCGCGTGCTG GCCGGCGTCA ACGTGCCGAT GCTCTGGCGT 
GCCCTCAACT ACGCACGGCT GCCGCTCGAC GAGCTGGTCA GCCGGGCCAT GATCGGCGCC 
ACGCAAGGCG TGCTGCCGGT GGCTTCGACC CGACCCCAGA ACCAGGTGCT ACAGACCAAA 
TCCCATGATT CGCTCGACCA TCAACATCAG CAATAA
 
Protein sequence
MARLLILAHA PLASALRAVA EHTFPELVER VFALDVVPHE PPEQVEARAR EFLAAGADAD 
PDVLVLTDVF GATPANVAQR LADGSRIRVL AGVNVPMLWR ALNYARLPLD ELVSRAMIGA 
TQGVLPVAST RPQNQVLQTK SHDSLDHQHQ Q