Gene Lcho_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1022 
Symbol 
ID6159705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1092131 
End bp1092733 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID641663772 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_001790058 
Protein GI171057709 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG CTGCCGCCCC CGCCGGCGAC GCCCCTGCCA AAAAGGGCTC GAAAAAGCTG 
ATCATCATCA TCGCCGCGGT GGTTCTGCTG CTCGTGGTGG GGGGTGGTGC GGCGCTGTTC 
CTGATGAAGA AGAATGCCGC CGCGGAGGGC GACGAGGCCG ACGCCGATGG CGCACACGCG 
CCGGCGGCCG CCCATGCGCC CGCCCCGAAG CCGCGCAAGC ACGATTCGGC ACACCCGCCC 
ACCTACGTGG CGCTCGACCC GTTTGTCGTC AACCTGGCCG ACCGCGACTC GGAGCGTTAT 
GCGCAGATCG GCATGACGCT GGAAGTCGAC GACCCGAAGT TCGCCGAAGA GATGAAGGGC 
TACATGCCCG CGATCCGCAA CGCGGTGCTG ATGATCCTGG CGCACAAGAC CTCGACCGAA 
CTGCTCGAGC GCGAAGGCAA GGAAAAGCTC GCCGAAGAGG TGATGCGCGA GGCGGTCCGG 
CCGATGGGCA TCGAGATCGA CGCCGACGAG CCCGACGACA CCGGCGGCAA GAAGAAGCGC 
CGCCGCGCGC CGGTCTACAA CCCGGTGCAG CAGGTGCATT TCTCGGCCTT CATCATTCAA 
TGA
 
Protein sequence
MSAAAAPAGD APAKKGSKKL IIIIAAVVLL LVVGGGAALF LMKKNAAAEG DEADADGAHA 
PAAAHAPAPK PRKHDSAHPP TYVALDPFVV NLADRDSERY AQIGMTLEVD DPKFAEEMKG 
YMPAIRNAVL MILAHKTSTE LLEREGKEKL AEEVMREAVR PMGIEIDADE PDDTGGKKKR 
RRAPVYNPVQ QVHFSAFIIQ