| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1019 |
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| Symbol | |
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| ID | 6159864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1088545 |
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| End bp | 1089945 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663769 |
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| Product | flagellar protein export ATPase FliI |
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| Protein accession | YP_001790055 |
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| Protein GI | 171057706 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGT TGGCGGGGCG CTGGGTGCGC TACCTCGACG ATCTGCAGAA TTTCGCCAGC
GCGCCGCAGC CGCTGGCCAC CCACGGCACG CTGGTGCGGG TGTCGGGCCT GGTGCTCGAG
GCCGCGGGCA TCCGCATGCC GGTGGGCTCG CTGTGCGAGG TGCAGATGGC CGGCCAGCCG
CCGGTGCCGG CCGAGGTGGT CGGCTTCGCC GGCGACCGGG CCTACCTGAT GCCCACCGGC
GAGGTGCAGG GCCTCGTCAG CGGCGCCACC GTGGTGCCGC TGGAGACGCC GGTGCAGGCG
CCGGTGCTCG GCCGCACCGC CCACCCGTGG CGGCGCAACG AAGACCGTTC GCGCCACCTG
CCGGTCGGCG ACGGGCTGCT CGGCCGGGTG GTCGACGCCA ACGGCGAGCC GATGGACCGG
CTCGGCCCGC TGCAGGACGT GCACCCGCAG CCGCTGGCGC GCCGCCCGAT CAACGCGATG
GACCGCGATC CGGTGCGCAC CCCGCTCGAC ACCGGCGTGC GCTCGATCAA CGCCCTGCTG
ACGGTCGGCC GCGGCCAGCG CCTGGGCCTG TTCGCCGGCA CCGGCGTGGG CAAGTCGGTG
CTGCTGGGCA TGATGGCGCG CTACACCGAG GCCGACGTGA TCGTGGTCGG CCTGATCGGC
GAACGCGGCC GCGAAGTCAA GGAGTTCATC GAGGACATCC TCGGCGAGGA AGGCCGCGCC
CGCTCGGTGG TGGTGGCCGC GCCGGCCGAT TCGCCGCCGC TGACACGCAT GCAGGGCGCC
ACCTACGCCA CCGCGATCGC CGAATACTTC CGCGACCAGG GCCGCCACGT GCTGCTGCTG
ATGGATTCGC TGACGCGTTT CGCGATGGCG CAGCGCGAGA TCGCGCTGGC CATCGGCGAG
CCGCCGGCGA CCAAGGGCTA CCCGCCGAGC TGCTTTGCCA AGCTGCCGCA GCTGGTCGAG
CGCAGCGGCA ACGGGCAGAA GGGCCAGGGC TCGATCACCG CGTTCTACAC CGTGCTGAGC
GAGGGCGACG ACCAGCAGGA CCCGATCGCC GACGCCGCCC GAGGCATCCT CGACGGCCAC
ATCGTGCTGT CGCGCGAGCT GGCCGAGAGC GGCCACTACC CGGCGATCGA CATCGAGAAA
TCGATCTCGC GCGTGATGAC CAGCGTGGCC GCGCGCGAGC ACATCGAGGC CGCGCGGCGC
ATGCGCCAGC TGCTGTCGCG TGTCAACAAG GCGCGTGACC TGATCCAGCT GGGCGCCTAC
GCACCCGGCC ACGACGCCGA GCTCGACGCC GCCGTGCGTG CCCAGCCCGC CATCGTGGCG
CTGCTGCAGC AGGACACCTG GAGCTGTGCG CCGCTGGCTG ACAGCGTGGC GGCGCTGCGC
AAGATCACCC GCGCCGCCTG A
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| Protein sequence | MTELAGRWVR YLDDLQNFAS APQPLATHGT LVRVSGLVLE AAGIRMPVGS LCEVQMAGQP
PVPAEVVGFA GDRAYLMPTG EVQGLVSGAT VVPLETPVQA PVLGRTAHPW RRNEDRSRHL
PVGDGLLGRV VDANGEPMDR LGPLQDVHPQ PLARRPINAM DRDPVRTPLD TGVRSINALL
TVGRGQRLGL FAGTGVGKSV LLGMMARYTE ADVIVVGLIG ERGREVKEFI EDILGEEGRA
RSVVVAAPAD SPPLTRMQGA TYATAIAEYF RDQGRHVLLL MDSLTRFAMA QREIALAIGE
PPATKGYPPS CFAKLPQLVE RSGNGQKGQG SITAFYTVLS EGDDQQDPIA DAARGILDGH
IVLSRELAES GHYPAIDIEK SISRVMTSVA AREHIEAARR MRQLLSRVNK ARDLIQLGAY
APGHDAELDA AVRAQPAIVA LLQQDTWSCA PLADSVAALR KITRAA
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