Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1004 |
Symbol | |
ID | 6160166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1072487 |
End bp | 1073023 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641663754 |
Product | transcriptional activator FlhC |
Protein accession | YP_001790040 |
Protein GI | 171057691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGCCA AGAGCATCCT GACCGAAGCC AAGCAGATCG AGCGTGCCAT CACGCTGATC AAGCTCGGTG CACGCCTGCA GGTGCTGGAG TCGGAGACCG ACCTGTCCTA CGAGCGCCTG CTGCGCCTGT ACAAGGAAGT CGCCGGCAAG TCGCCGAGCA AGGGCCAGCT GCCCTTTTCG ACCGACTGGT TCATGACCTG GCAGCCCAAC ATCCACGCCA GCCTGTTCCT GAACACGCAC GAGTACCTGA ACAAGGTCGC CGAGATGGAG GAGATCGACA CCATCATCAA GGCCTACCAG CTCTACCTCG AGCAGACGCA ATCGCAGGGT CTCGAGCCCC TGTTGTCGGT GACCCGTGCC TGGCGGCTGG TCAAGTTCGT CGACAACGGC ATGCTCACGA TGACCGCCTG CTCCAAGTGC GGCGGCCACT TCGTGACCCA CCCGCACGAG ATCGCCAAGC ACTACGTGTG CGGCCTGTGC AACCCGCCGG CGCGGGCCGG CAAGGGCAAG GCCAGCGGCG GCCTGCAGCT TCACTGA
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Protein sequence | MRAKSILTEA KQIERAITLI KLGARLQVLE SETDLSYERL LRLYKEVAGK SPSKGQLPFS TDWFMTWQPN IHASLFLNTH EYLNKVAEME EIDTIIKAYQ LYLEQTQSQG LEPLLSVTRA WRLVKFVDNG MLTMTACSKC GGHFVTHPHE IAKHYVCGLC NPPARAGKGK ASGGLQLH
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