Gene Lcho_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0999 
Symbol 
ID6163302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1067728 
End bp1068126 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID641663749 
Productresponse regulator receiver protein 
Protein accessionYP_001790035 
Protein GI171057686 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT CATCAGACCT CAAATTTCTG GTTGTCGACG ATTTTTCGAC CATGCGCCGC 
ATCGTGCGCG GGCTGCTCAA GGAAATGGGC TGCAACAACG TCGAGGAGGC CGAGGACGGC
CACGTCGCGC TCAACATGCT CAAGAACAGC CGCTTCGACT TCGTCGTCAG CGACATCAAC
ATGCCGGTCA TGAACGGCTT CGAGCTGCTC AAGGCGGTCA AGGCCGACGA GACCCTCAAG
CACCTGCCGG TGCTGATGGT GACCGCCGAG GCGCGCAAGG AAGACATCGT GCTGGCCGCC
CAGAGCGGCG CGGCCGGCTA CATCGTCAAG CCCTTCACCA AGGCCACGCT GGAAGAAAAA
GTCACCAAGA TCATGCAGAA GCTGGCTGCG ACGGCCTGA
 
Protein sequence
MTTSSDLKFL VVDDFSTMRR IVRGLLKEMG CNNVEEAEDG HVALNMLKNS RFDFVVSDIN 
MPVMNGFELL KAVKADETLK HLPVLMVTAE ARKEDIVLAA QSGAAGYIVK PFTKATLEEK
VTKIMQKLAA TA