Gene Lcho_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0998 
Symbol 
ID6163301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1067076 
End bp1067708 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID641663748 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_001790034 
Protein GI171057685 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG AAGACTTTGC CGCGTTTGCA CCCCCCGAAG GCGTCGTCAC GTCGCCGGAG 
GTGTTCCAGC AGATCGGCGA GATCACCCGC CTGCTGCACG ACACGCTGCA GCAGCTGGGC 
GTGATGCCCA AGCTGCAGAC CGCCGCCGAG GGCCTGCCCG ACGCCCGCAG CCGCCTGAAC 
TACATCGCCA ACAAGACCTC CGACGCCGCC AACAAGGTGC TGAACTCGGT CGACCACGCC 
AAGAGCGAGC ACCTGCGCAT CTCGGCCGAC ACGCGGGCGC TGGCCGCCGC GCTGGTGGCC 
GACCCGGTCA AGGCGGTGGC CAGCGGTGCG GTGCTGAACT TCGCGCACGA CGTCGAGGCC 
TCGACCGCAC GCATCGACCA GCACCTGACC GACATCATGC TGGCGCAGGA TTTCCATGAC 
CTCACCGGTC AGGTGGTCGC CAAGGTGGTC GCACTGGCGA TCGACCTGGA AGACAGCCTC 
GTCAAGCTGC TGGTGCAGGT GGTGCCGCCC GACCAGCGCG ACAAGGTCGA CAGCTCGGTG 
CTCAACGGCC CGGTCGTCAA CCCCGAAGGC CGCACCGACG TGGTCAGCGA CCAGAGCGAG 
GTCGACGACC TGCTCGCCAG CCTGGGTTTC TGA
 
Protein sequence
MKIEDFAAFA PPEGVVTSPE VFQQIGEITR LLHDTLQQLG VMPKLQTAAE GLPDARSRLN 
YIANKTSDAA NKVLNSVDHA KSEHLRISAD TRALAAALVA DPVKAVASGA VLNFAHDVEA 
STARIDQHLT DIMLAQDFHD LTGQVVAKVV ALAIDLEDSL VKLLVQVVPP DQRDKVDSSV 
LNGPVVNPEG RTDVVSDQSE VDDLLASLGF