Gene Lcho_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0997 
Symbol 
ID6162445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1066104 
End bp1066877 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID641663747 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_001790033 
Protein GI171057684 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAT TCAACGAAGA AACCGTCACG TCCGTCCACC ACTGGACCGA CCGGTTGTTC 
AGCTTCAAGA CCACCCGCGA TCCGGCGTTC CGGTTCTCGA ACGGCCATTT CGTGATGATC
GGCCTGCCGG TCAACGGCAA GCCGCTGCTG CGTGCCTACA GCGTGGCCAG CGCCAACTAC
GAAGAAGAGC TCGAGTTCTT CAGCATCAAG GTGCCCGACG GCCCGCTGAC CTCGCGGCTG
CAGCACCTGA AGGTGGGCGA CAAGGTGATC GTGGGTCGCA AGCCCACCGG CACGCTGCTG
ATCGACTACC TCAACCCCGG CAAGAACCTC TACCTGTTCG GCACCGGCAC CGGCCTGGCG
CCGTTCCTGA GCATCATCCG CGACCCCGAC ACCTACGAGC GCTTCGAGAA GGTGATCCTG
GTGCACGGCT GCCGCGAGGT GGCCGAACTG GCCTACCAGG ACCTGATCAA GCGCGAGCTG
CCCGAGCACG AGTTCCTCGG CGAGCTGGTC AACGGCAAGC TGCTGTACTG CCCGACCGTC
ACGCGCGAGC CCTTCGAGCG CCAGGGCCGC ATCACCGACC TGATCAACGA CGGCCGGCTC
TGGAACGACT TCGGCCTGCC CGCACTCGAC CCGGCGCGCG ACCGCGCCAT GATCTGCGGC
AGCCCGGCGA TGCTGCGCGA CCTGAAGCAC ATGCTCGAGG AGCGCCATTT CACCGAAGGC
AGCACCACCA CCCCGGGCGA CTTCGTGATC GAGCGGGCCT TTGCCGAGCA GTAG
 
Protein sequence
MKPFNEETVT SVHHWTDRLF SFKTTRDPAF RFSNGHFVMI GLPVNGKPLL RAYSVASANY 
EEELEFFSIK VPDGPLTSRL QHLKVGDKVI VGRKPTGTLL IDYLNPGKNL YLFGTGTGLA
PFLSIIRDPD TYERFEKVIL VHGCREVAEL AYQDLIKREL PEHEFLGELV NGKLLYCPTV
TREPFERQGR ITDLINDGRL WNDFGLPALD PARDRAMICG SPAMLRDLKH MLEERHFTEG
STTTPGDFVI ERAFAEQ