| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0991 |
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| Symbol | |
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| ID | 6162182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1059647 |
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| End bp | 1060789 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663741 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001790027 |
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| Protein GI | 171057678 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG TGTTCAAACA GATCGCCGCC GCCGCGCTGC TGACCCTGAG CGGCACCGCC
GCGCTGGCCG ACATCACCAT CGGCGTGAGC CTGCCGCTGA CCGGCCCGGC CAGCGGCCTG
GGCATCCCGG CCAACAACGG CGTCAAGCTC TGGCCGACCC ACATCGGCGG CGAGAAGCTC
AACGTCGTCG TGCTCGACGA CGCAACCGAC CCGACCAAGG CGGTGCAGAA CGCCAAGCGC
TTCGTCAGCG ACGACAAGGT CGACCTGGTG GTCGGCTCGG TGGCCACGCC GGCGGCGCTG
GCGATGGCCG ACACGGTGGC CGAATCGGGC ACGCCGCACT TCATGCTGTC GCCCGCGGTG
CTGCAGGCCG GCAAGGACGG CTGGGCCTTC CGCCTGCCGC AATCCAACGC CGTGATGTCG
CACGCCATGC TCAAGCACAT GAGCAAGCTG GGCGTGAAGA CGGTCGGCTT CCTCGGCTAC
ACCGACGCCT ACGGCGAGAG CTGGCTGAAG GACTTCCAGG CCGAAGCCAC CGCGATGGGG
CTGCCGATCA AGATCGTCGC CACCGAGCGC TTCGCCCGCA GCGACACCGC CGTGACCGGC
CAGGCGCTCA AGCTGGTTTC GGCCAACCCG GACGCGATGC TGATCGTGGC CTCCGGCTCG
GGCGCGGCGA TGCCGCACAA GGCGATCGTC GAACGCGGCT TCAAGGGCAA GATCTACCAG
ACCCACGCCG CCGCCACCCG CGACCTGATG CGCATCGGCG GCAAGGACGT CGAAGGCGCG
TTCGTGGTCT CAGGCCCGGC GGTGGTGGCC GAGCAGCTGA GCGACGCCCA TCCGTCCAAG
AAGATCGCGC TCGAGTTCGT GCAGAAGTAC GAGAAGGCCT ACGGCGCCGG CTCGCGCAAC
CAGTTCGCCG GCCACGCGTA TGACGCCGCC GTGGTGCTGG AGAAGATCGT GCCGATGGCG
CTCAAGAAGG CCAAGCCGGG CACCAAGGAA TTCCGCGCCG CGCTGAAGGA AGCCACCGAG
ACGATGGGCC GCACGGTCGT CGCGCACGGC GTGCTGAACT ACACGAAGGA CAACCACTGG
GGCTTCACGA CCGAGACCGG CGTGATCCTG AAGGTGGTCA ACGGCGACTG GAAGGTCGAA
TAA
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| Protein sequence | MKTVFKQIAA AALLTLSGTA ALADITIGVS LPLTGPASGL GIPANNGVKL WPTHIGGEKL
NVVVLDDATD PTKAVQNAKR FVSDDKVDLV VGSVATPAAL AMADTVAESG TPHFMLSPAV
LQAGKDGWAF RLPQSNAVMS HAMLKHMSKL GVKTVGFLGY TDAYGESWLK DFQAEATAMG
LPIKIVATER FARSDTAVTG QALKLVSANP DAMLIVASGS GAAMPHKAIV ERGFKGKIYQ
THAAATRDLM RIGGKDVEGA FVVSGPAVVA EQLSDAHPSK KIALEFVQKY EKAYGAGSRN
QFAGHAYDAA VVLEKIVPMA LKKAKPGTKE FRAALKEATE TMGRTVVAHG VLNYTKDNHW
GFTTETGVIL KVVNGDWKVE
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