| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0990 |
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| Symbol | |
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| ID | 6162181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1058605 |
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| End bp | 1059642 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663740 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001790026 |
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| Protein GI | 171057677 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCT CGATCGCCAG CATCCTGGCA CTCGATGGTT TCACCAACGG CGCGATCTAC
GCGCTGCTGG CGATGGCCAC GGTGCTGCTG TTCGCCGTGA CACGGGTGAT CTTCATCCCG
CAGGGCGAGT TCGTGGCCTT CGGCGCGCTC ACGCTCGCCA TGCTGCAGAT GGGCCAGGTG
CCCGGCACGG TCTGGCTTCT GCTGATCATG GCGGGGCTGG CTGCGGCGAC CGAGCTGTTC
CACGGCCTGC GCCGCCGCCT GCCGGCGGCC AAGCTGGCCG GCGCGGTGCT GGCCACGCTG
GCCTATCCGG TAGCGATCTC GCTGCTGGCG GGCTGGGCGG CGCCGCAGCA GCTGCCGCTG
CTGCTGCAGG CGCTGCTGAC GCTGGCGATC GTCACGCCGA TGGGCTCGCT GCTGTATCGG
CTGGCCTATG AATCGCTGGC CGATGCCACC GTGCTGGTGC TGCTGATCGT GTCGGTGGGC
GTGCACTTCG CGCTGACCGG CCTGGGTCTG CTGTTCTTCG GCGCCGAGGG TTTCCGCAAC
CCGAGCTTCT GGGACGAGCG TTTCGCCGCC GGCCCGCTGA TGCTGAGCGG CCAGACGCTG
ATCATCTTCC TGGCCTCGGG CGCGCTGATC GTGATGCTGT GGCTGTTCTT CGAGCGCTCG
CTGTACGGCA AGGCGCTGCG CGCCACCGCG GTGAATCGCC TGGGCGCGCG GCTGATGGGC
ATCAAGACCA CCGGCGCGGG CCGGCTCAGC TTCACGATGG CGGCCTTCAT CGGCGCGCTG
TCGGGCCTGC TGATCGGACC GACCACCACG ATCTTCTACG ACAGCGGTTT CCTGATCGGC
CTCAAAGGCT TCGTCGCCGC GGTGTTTGCC GGGCTGTCGA GCTATCCGCT GGCGATGGTC
GGCGCGCTCG GGGTGGGCGT GCTCGAGTCC TTCGGCTCGT TCTGGGCCAG TTCCTTCAAG
GAGGTGATCG TGTTCACCTC GATCCTGCCG GTGCTGTTGT GGCGCAGCCT GCGCGATCCG
CACACCGAGG AAGAGTGA
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| Protein sequence | MDFSIASILA LDGFTNGAIY ALLAMATVLL FAVTRVIFIP QGEFVAFGAL TLAMLQMGQV
PGTVWLLLIM AGLAAATELF HGLRRRLPAA KLAGAVLATL AYPVAISLLA GWAAPQQLPL
LLQALLTLAI VTPMGSLLYR LAYESLADAT VLVLLIVSVG VHFALTGLGL LFFGAEGFRN
PSFWDERFAA GPLMLSGQTL IIFLASGALI VMLWLFFERS LYGKALRATA VNRLGARLMG
IKTTGAGRLS FTMAAFIGAL SGLLIGPTTT IFYDSGFLIG LKGFVAAVFA GLSSYPLAMV
GALGVGVLES FGSFWASSFK EVIVFTSILP VLLWRSLRDP HTEEE
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